| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4901 |
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| Symbol | |
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| ID | 5872714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5470395 |
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| End bp | 5471252 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550037 |
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| Product | urea ABC transporter, ATP-binding protein UrtD |
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| Protein accession | YP_001671121 |
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| Protein GI | 167035890 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0221262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGGCG TGCCCCCGGT TCATCCGGAA TTCATGTTGG AGCCGGTGTT CGACCACCTC
GGCGCCGGTC GCGACGCCAT CGGCCTGGGC CAAAGCCGCA AGGCTGGCCT CGACACCCGC
CACGGCACGG TGCTGAGCCT TGAAGACATC AGCGTCAGCT TCGATGGTTT CAAGGCGCTC
AACGCGCTGA ACCTGTACAT CGGTGTGGGC GAGCTGCGCT GCATCATCGG TCCCAACGGC
GCCGGCAAGA CTACGATGAT GGACGTGATC ACCGGCAAGA CTCGCCCTGA CACCGGCAGC
GCTTTCTTTG GCGACACCCT CGACCTGACC CGCATGAGCG AATACCAGAT CGCCCAGGCC
GGCATTGGCC GCAAGTTCCA GAAGCCCACG GTATTCGAGG CGCTGACAGT GTTCGAAAAC
CTGGAGCTGG CGCTGAAGGC CGACAAGTCG GTATGGGCCA GCCTGGCAGC GCGGCTGAGC
GGCGAGCAAC GCCAGCGCAT CGAAGAGGTG CTGAGCACCT TGCGCCTGCT GCCCCTGGCC
CAGCGCCAGG CTGGCTTGCT GTCGCACGGA CAGAAGCAGT TTCTGGAGAT CGGCATGCTG
CTGGTGCAGG AGCCGAAGTT GCTGTTGCTG GATGAACCGG TGGCGGGCAT GACCGATGCC
GAGACCGAGT TCACCGCCGA GTTGTTCAAG GGCCTGGCTG GCACGCATTC GTTGATGGTG
GTGGAGCATG ACATGGGCTT TGTCGGCAGC ATCGCCGACC ATGTCACGGT GCTGCACCAG
GGCAGTGTGC TGGCAGAAGG GTCGCTGGAG CAGGTGCAGG CGGATGAGCG GGTGGTCGAG
GTGTATCTGG GCCGATGA
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| Protein sequence | MRGVPPVHPE FMLEPVFDHL GAGRDAIGLG QSRKAGLDTR HGTVLSLEDI SVSFDGFKAL
NALNLYIGVG ELRCIIGPNG AGKTTMMDVI TGKTRPDTGS AFFGDTLDLT RMSEYQIAQA
GIGRKFQKPT VFEALTVFEN LELALKADKS VWASLAARLS GEQRQRIEEV LSTLRLLPLA
QRQAGLLSHG QKQFLEIGML LVQEPKLLLL DEPVAGMTDA ETEFTAELFK GLAGTHSLMV
VEHDMGFVGS IADHVTVLHQ GSVLAEGSLE QVQADERVVE VYLGR
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