| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4900 |
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| Symbol | |
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| ID | 5872713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5469319 |
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| End bp | 5470398 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550036 |
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| Product | urea ABC transporter, permease protein UrtC |
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| Protein accession | YP_001671120 |
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| Protein GI | 167035889 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0153709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGC CACTGCTTGT CACCGCTACG CAAAAGGCCG GGCCACGCCT GACCCTGGCC
ATCGGCGCCG TCGTCGTGCT GCTGCTCGTC GCCCTGCCGC TGCTCTCGCT GCTGCCGGCG
GACCATGCCC TGCAGGTGTC GGCCTACACC CTGACCCTGG TCGGCAAGAT CCTCTGTTAC
GCCATCGTCG CCCTGGCCCT GGACCTGGTC TGGGGCTATG CCGGGCTGCT GTCGCTGGGC
CATGGCCTGT TCTTCGCCCT GGGCGGCTAT GCCATGGGCA TGTACCTGAT GCGCCAGGCG
GCCGGCGACG GCCTGCCGGG GTTCATGACC TTTCTTTCGT GGACCGAGCT GCCGTGGTAC
TGGGCCGGCA CCCAGCATTT TGCCTGGGCC CTGTGCCTGG TGGTGCTGGC ACCGGGGCTG
CTGGCGCTGG TGTTCGGCTG GTTCGCCTTC CGCTCGCGGA TCAAGGGCGT GTACTTCTCG
ATCATGACCC AAGCCCTGAC CTTCGCCGGC ATGCTGCTGT TCTTCCGCAA CGAAACCGGT
TTTGGCGGCA ACAACGGGTT TACCAACTTC CGCACCATCC TCGGCTTCGA CATTACCGCG
CAAGGCACTC GCGCGGTGCT GTTCCTGCTC ACGGTCGGCC TTTTGCTGGC CAGCTTGTAC
CTGTGCTGGC GCCTGACCCG CAGCAAGTTC GGCCGCCTGC TCACGGCGGT GCGCGATGCC
GAAAACCGCA TGATGTTCTG CGGCTACGAC CCACGCGGCT TCAAGCTGCT GGTGTGGGTC
CTGAGCGCCG TGCTGTGCGG CCTGGCCGGG GCGTTGTATG TGCCACAGGT GGGCATCATC
AACCCCAGCG AAATGTCGCC GACCAACTCC ATCGAAGCCG CCGTGTGGGT GGCCTTGGGC
GGGCGCGGCA CGCTAATCGG CCCGTTGCTC GGCGCCGGCC TGGTCAATGG CATGAAAAGC
TGGTTCACCG TGGCCTTCCC GGAGTTCTGG CTGTTCTTCC TGGGCGCACT GTTCATTCTT
GTCACCCTGT ACCTGCCCAA GGGCGTGGTC GGCCTGTTGA AGAAAAGGAG CCAGCCATGA
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| Protein sequence | MNQPLLVTAT QKAGPRLTLA IGAVVVLLLV ALPLLSLLPA DHALQVSAYT LTLVGKILCY
AIVALALDLV WGYAGLLSLG HGLFFALGGY AMGMYLMRQA AGDGLPGFMT FLSWTELPWY
WAGTQHFAWA LCLVVLAPGL LALVFGWFAF RSRIKGVYFS IMTQALTFAG MLLFFRNETG
FGGNNGFTNF RTILGFDITA QGTRAVLFLL TVGLLLASLY LCWRLTRSKF GRLLTAVRDA
ENRMMFCGYD PRGFKLLVWV LSAVLCGLAG ALYVPQVGII NPSEMSPTNS IEAAVWVALG
GRGTLIGPLL GAGLVNGMKS WFTVAFPEFW LFFLGALFIL VTLYLPKGVV GLLKKRSQP
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