Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4892 |
Symbol | |
ID | 5872705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5458509 |
End bp | 5458994 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550028 |
Product | hypothetical protein |
Protein accession | YP_001671112 |
Protein GI | 167035881 |
COG category | [S] Function unknown |
COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.489085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.697397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAAGC ACGCCCTCGT CATGGCCGCC CTGCTGCTGC CTGGCGCCTT TGCCAATGCC CACGAATACA GCGTGGGTGA CCTGCACATT GCCCACCCCT GGTCGCTGCA GCTGCCACCC AACGCGCCCA ACGTCGCCGC GTATTTCGTG GTGCACAACA ATGGCCAGGC CGACGACCGC CTGCTCAGTG TCGACAGCCC CATCAGCGAT GACGCGCAAC TGCACGAACA TGCCATGAGC GCCAGCGGCG CCATGAAGAT GCAACAGGTG CCCAGCGTGG TGGTGCCTGC CGGCAAGGAC CTGACCTTCG CCCCCAGCGC CTACCATGTG ATGCTGATGC AGCCCAAGGA CCGCAGCCTG CTCACGGATG GCAAACGCTT CCCGTTGACC CTGCATTTCG AAAAGGCCGG CGACATCACC GTCGAAGTGG CTGTGCAGAA GCAGGCGCCA GCGGACCAGC CGCAAGCCCA CGAACACGCG CACTGA
|
Protein sequence | MLKHALVMAA LLLPGAFANA HEYSVGDLHI AHPWSLQLPP NAPNVAAYFV VHNNGQADDR LLSVDSPISD DAQLHEHAMS ASGAMKMQQV PSVVVPAGKD LTFAPSAYHV MLMQPKDRSL LTDGKRFPLT LHFEKAGDIT VEVAVQKQAP ADQPQAHEHA H
|
| |