Gene PputGB1_4892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4892 
Symbol 
ID5872705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5458509 
End bp5458994 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content64% 
IMG OID641550028 
Producthypothetical protein 
Protein accessionYP_001671112 
Protein GI167035881 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.489085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.697397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGC ACGCCCTCGT CATGGCCGCC CTGCTGCTGC CTGGCGCCTT TGCCAATGCC 
CACGAATACA GCGTGGGTGA CCTGCACATT GCCCACCCCT GGTCGCTGCA GCTGCCACCC
AACGCGCCCA ACGTCGCCGC GTATTTCGTG GTGCACAACA ATGGCCAGGC CGACGACCGC
CTGCTCAGTG TCGACAGCCC CATCAGCGAT GACGCGCAAC TGCACGAACA TGCCATGAGC
GCCAGCGGCG CCATGAAGAT GCAACAGGTG CCCAGCGTGG TGGTGCCTGC CGGCAAGGAC
CTGACCTTCG CCCCCAGCGC CTACCATGTG ATGCTGATGC AGCCCAAGGA CCGCAGCCTG
CTCACGGATG GCAAACGCTT CCCGTTGACC CTGCATTTCG AAAAGGCCGG CGACATCACC
GTCGAAGTGG CTGTGCAGAA GCAGGCGCCA GCGGACCAGC CGCAAGCCCA CGAACACGCG
CACTGA
 
Protein sequence
MLKHALVMAA LLLPGAFANA HEYSVGDLHI AHPWSLQLPP NAPNVAAYFV VHNNGQADDR 
LLSVDSPISD DAQLHEHAMS ASGAMKMQQV PSVVVPAGKD LTFAPSAYHV MLMQPKDRSL
LTDGKRFPLT LHFEKAGDIT VEVAVQKQAP ADQPQAHEHA H