Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4888 |
Symbol | |
ID | 5872701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5455692 |
End bp | 5456411 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641550024 |
Product | cobalt-precorrin-6x reductase |
Protein accession | YP_001671108 |
Protein GI | 167035877 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2099] Precorrin-6x reductase |
TIGRFAM ID | [TIGR00715] precorrin-6x reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.179164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGCGC GCATCCTGCT GCTGGGCGGT GTCACTGAAG CCCTGGCCAT CGCTCGTCGC CTCGGCCCGC AGCATGTCTA CAGCCTGGCC GGTATCGGCC GCGTACCGCA GGACCTGCAA TGCCAGGTAC GGGTCGGCGG CTTTGGCGGC GCCGAGGGGT TGGCCAACTA CCTGCGCGAG GCGTGTATCA CCCTACTGGT CGATGCCACC CACCCCTACG CTGCACAGAT CAGCCGCAAT GCTGCCAGCG CTGCGCGTAG CGCCGGCGTC ACGTGCTGGG CCTTGCGCCG CCCGGCCTGG CAAGCGCAAG CGGGGGACGA CTGGCGTGAG GTCGAGGACT GGGCGGGGCT GAGAGAGGCA CTCAAGCCGT TCCGCAGGCC TCTGTTCACG CTAGGCCGCG AGCCGTTGCA ACACCTGGGC GAGATTCCGC CGGAGCAGTT CTGGACTTTG CGGGCGCTGG AAGCCTGCCC AGGCAATGAG CGCTGCGAAG TGATCGGTGC ACGCGGGCCG TTCCATATCG AGGATGAACG GGCATTGTTC CTGCGTCGCA GCATCGATGT GCTGATCAGC AAGAACAGCG GCAGCGTGGC GACCGAGCCA AAGCTGGAGG TAGCACGGGA GTTGGGCGTA CCGGTGTTGG TACTGAAGCG GCCAGCTTTG CCGGATGTGG ACCGAGCATT CGAATCACCC TCAGACCTGG CTGCAGCGCT CGACCTGTAA
|
Protein sequence | MTARILLLGG VTEALAIARR LGPQHVYSLA GIGRVPQDLQ CQVRVGGFGG AEGLANYLRE ACITLLVDAT HPYAAQISRN AASAARSAGV TCWALRRPAW QAQAGDDWRE VEDWAGLREA LKPFRRPLFT LGREPLQHLG EIPPEQFWTL RALEACPGNE RCEVIGARGP FHIEDERALF LRRSIDVLIS KNSGSVATEP KLEVARELGV PVLVLKRPAL PDVDRAFESP SDLAAALDL
|
| |