Gene PputGB1_4888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4888 
Symbol 
ID5872701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5455692 
End bp5456411 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content66% 
IMG OID641550024 
Productcobalt-precorrin-6x reductase 
Protein accessionYP_001671108 
Protein GI167035877 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2099] Precorrin-6x reductase 
TIGRFAM ID[TIGR00715] precorrin-6x reductase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.179164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGC GCATCCTGCT GCTGGGCGGT GTCACTGAAG CCCTGGCCAT CGCTCGTCGC 
CTCGGCCCGC AGCATGTCTA CAGCCTGGCC GGTATCGGCC GCGTACCGCA GGACCTGCAA
TGCCAGGTAC GGGTCGGCGG CTTTGGCGGC GCCGAGGGGT TGGCCAACTA CCTGCGCGAG
GCGTGTATCA CCCTACTGGT CGATGCCACC CACCCCTACG CTGCACAGAT CAGCCGCAAT
GCTGCCAGCG CTGCGCGTAG CGCCGGCGTC ACGTGCTGGG CCTTGCGCCG CCCGGCCTGG
CAAGCGCAAG CGGGGGACGA CTGGCGTGAG GTCGAGGACT GGGCGGGGCT GAGAGAGGCA
CTCAAGCCGT TCCGCAGGCC TCTGTTCACG CTAGGCCGCG AGCCGTTGCA ACACCTGGGC
GAGATTCCGC CGGAGCAGTT CTGGACTTTG CGGGCGCTGG AAGCCTGCCC AGGCAATGAG
CGCTGCGAAG TGATCGGTGC ACGCGGGCCG TTCCATATCG AGGATGAACG GGCATTGTTC
CTGCGTCGCA GCATCGATGT GCTGATCAGC AAGAACAGCG GCAGCGTGGC GACCGAGCCA
AAGCTGGAGG TAGCACGGGA GTTGGGCGTA CCGGTGTTGG TACTGAAGCG GCCAGCTTTG
CCGGATGTGG ACCGAGCATT CGAATCACCC TCAGACCTGG CTGCAGCGCT CGACCTGTAA
 
Protein sequence
MTARILLLGG VTEALAIARR LGPQHVYSLA GIGRVPQDLQ CQVRVGGFGG AEGLANYLRE 
ACITLLVDAT HPYAAQISRN AASAARSAGV TCWALRRPAW QAQAGDDWRE VEDWAGLREA
LKPFRRPLFT LGREPLQHLG EIPPEQFWTL RALEACPGNE RCEVIGARGP FHIEDERALF
LRRSIDVLIS KNSGSVATEP KLEVARELGV PVLVLKRPAL PDVDRAFESP SDLAAALDL