Gene PputGB1_4886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4886 
Symbol 
ID5872699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5453397 
End bp5454608 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content70% 
IMG OID641550022 
Productprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 
Protein accessionYP_001671106 
Protein GI167035875 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCCT GGCTGACAGT AGTAGGCATC GGCGAAGACG GCTTCAGTGG CCTGGGCAAA 
CAGGCCCGGC GTGCGCTGTT GGGCGCTGCG CGGATCTTCG GCAGCCCACG CCAGCTGGCC
CTGCTACCGC GCTGCGTGCC CGGCGAGCGG CTGGGCTGGC CAAGCCCGTT TTCGCTGGCC
CCGGTGCTGG CCCTGCGTGG CGAGCCCGTG TGCGTACTGG CCAGCGGCGA CCCGATGTTC
TACGGCGTCG GTGCCAGCCT TGCACGCCAG GTACCCGCCG ATGAAATGCG CGTACTGTCG
ATGCCCACCT CTTGCGCACT GGCCGCCGCC CGCCTGGGCT GGCCGCTGCA GGATGTGCAG
GTGGTGTCTC TGGTAGCCCG CCCCCTGGCG GCGCTCAATG CTCACCTGCA CAGCGGCATA
CGTTTGCTGG TGCTGAGCAA CGACGGCGAC AGCCCGGCGG CCATTGCCAC GCTGCTGCGC
GAGCGTGGCT ACGGGCCAAG CCGCCTGCGT GTGTTCGAAC ACCTGGGAGG CCCGCACGAA
CGTGTGTTGG CCGGCACCGC CCAAGACTGG CCACACGCCG ATATCGCAGC GCTCAACCTG
GTGGCCATCG AATGCCTGGC CACGCCCGAA GCGCCGCGTC TGCACCGGCT GGCCGGGCTG
CCGGACAGCG CCTTCCGGCA TGACGGCCAA CTGACCAAAC GCGATGTTCG CGCCATCACC
CTGGCGCGCC TGGCGCCGCA GCCCGGTGAA CTGCTGTGGG ACGTGGGCGC GGGCTGCGGC
TCGATCGGCA TCGAATGGAT GCGCGCCCAC CCGGCCTGCC GCGCGCTGGC CATCGAGGCC
GACGAAGGCC GCCAAGGCTT CATCGAACAT AACCGCGATG CATTGGGTGT ACCCGGCCTG
CAGCTGGTGC GCGGCAAGGC CCCAGCGGCA CTGCAAGGCC TGGAACGCCC GGATGCGATC
TTCATCGGCG GCGGCGTCAC CCGCGAGGGT GTGCTCGACC TGTGCTGGGC CAGCCTGCGC
CCCGGTGGCC GGCTGGTAGC CAACGCGGTA ACCCTGCAAA GCGAACTGGC CCTGGCGTCT
TTTCGCGAGC AGCACGGTGG TGAGCTGACC CGCATCCATG TCGCCCACGC CCAGCCCTTG
GGTGCGTTCG ACACCTGGCG CCAGGCGCTG CCGATCACCC TGCTGGATGT GGTGAAGCCC
GCCGATGCGT GA
 
Protein sequence
MAPWLTVVGI GEDGFSGLGK QARRALLGAA RIFGSPRQLA LLPRCVPGER LGWPSPFSLA 
PVLALRGEPV CVLASGDPMF YGVGASLARQ VPADEMRVLS MPTSCALAAA RLGWPLQDVQ
VVSLVARPLA ALNAHLHSGI RLLVLSNDGD SPAAIATLLR ERGYGPSRLR VFEHLGGPHE
RVLAGTAQDW PHADIAALNL VAIECLATPE APRLHRLAGL PDSAFRHDGQ LTKRDVRAIT
LARLAPQPGE LLWDVGAGCG SIGIEWMRAH PACRALAIEA DEGRQGFIEH NRDALGVPGL
QLVRGKAPAA LQGLERPDAI FIGGGVTREG VLDLCWASLR PGGRLVANAV TLQSELALAS
FREQHGGELT RIHVAHAQPL GAFDTWRQAL PITLLDVVKP ADA