Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4862 |
Symbol | |
ID | 5872675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5428986 |
End bp | 5429405 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641549998 |
Product | iojap-like protein |
Protein accession | YP_001671082 |
Protein GI | 167035851 |
COG category | [S] Function unknown |
COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.376874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGC AGAAAATTTA CGGCGAAGAA CTGGTCGCAG TGACCAAGGC AGCGCTGGAA GACGTCAAGG CCCAGGACAT CCAGGTCATC GACGTGCGCG AAAAGCACAG CCTGACCGAC TACATGATCA TTGCCACCGG TACCTCCAAC CGCCAGATCA ACGCGATGGC CGAAAAGGTC CGTGAAGCGG TCAAGGCCAA GGGCGCCCAG CCACTGGGTG AAGAAGGCAA AGGCGACAGC GACTGGGTGC TGCTGGACCT GAACGACGTC ATCGTGCACA TGATGACCGC CGCTGCCCGT CAGTTCTACG ACCTGGAGCG TCTGTGGCAG GGTGCCGAGC AAAGCCGTGC CGCCGATGGC AAGCACCACA GCCCGGACCA TGCTCACGAG TACTCCGACA AGCTCAAAGA CCGCGAATAA
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Protein sequence | MTKQKIYGEE LVAVTKAALE DVKAQDIQVI DVREKHSLTD YMIIATGTSN RQINAMAEKV REAVKAKGAQ PLGEEGKGDS DWVLLDLNDV IVHMMTAAAR QFYDLERLWQ GAEQSRAADG KHHSPDHAHE YSDKLKDRE
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