| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4861 |
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| Symbol | |
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| ID | 5872674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5428508 |
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| End bp | 5428975 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549997 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_001671081 |
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| Protein GI | 167035850 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.394825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGTCTGC GCCTGATTGC GGTCGGCTCG CGCATGCCCA AGTGGGTCGA GGAAGGCTGG
CATGAATATG CCAAGCGCCT GCCCACCGAG CTGTCGCTGG AGCTGGTGGA AATCCCGCTG
AATACCCGTG GCAAGAATGC CGACGTCGCT CGCCTGATCC GTCAGGAGGG CGAAGCCATG
CTGAGCAAGG TGCAGCCTGG GGAACGCATT GTCACCCTCG AGGTCCATGG CAAGCCCTGG
AGTACCGAGC AGCTGGCCAC CGAGCTGGAC CGCTGGCGCC TGGATGCGCG CACGGTGAAT
TTGATGGTGG GTGGCCCGGA AGGCCTGGCG CCCGAGGTTT GCGCGCGCGC CGAGCAACGT
TGGTCGCTGT CGCCGCTGAC GTTGCCGCAC CCGTTGGTAA GGATACTCAT CGGCGAGCAG
ATCTACCGCG CCTGGACCGT GCTGTCCGGG CACCCTTACC ACAAATGA
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| Protein sequence | MRLRLIAVGS RMPKWVEEGW HEYAKRLPTE LSLELVEIPL NTRGKNADVA RLIRQEGEAM
LSKVQPGERI VTLEVHGKPW STEQLATELD RWRLDARTVN LMVGGPEGLA PEVCARAEQR
WSLSPLTLPH PLVRILIGEQ IYRAWTVLSG HPYHK
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