| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4856 |
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| Symbol | |
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| ID | 5872669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5422048 |
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| End bp | 5423208 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549992 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001671076 |
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| Protein GI | 167035845 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.399898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA CCAACCTTGC CAAACGACTT TGCCTGCCTG TACTGCTGAT GATCACGCCT
GCCGCCTTCG CGGCAGAGCA GATGACGCCG GCGCCACCAC AACTGGCAGC CAAGTCCTAC
GTACTCATGG ACGCGTCCAG CGGCAACGTG CTGGTCGAGA ACAACGGTGA CGAGCGCCTG
CCGCCAGCCA GCCTGACCAA GCTGATGACC GCCTACATCG CCACCCTGGA CATCCGCCGT
GGCCAAATCG GTGAGAACGA CCCGGTTACC GTCAGCGAAA ACGCCTGGCG TACCGGCGGT
TCACGCATGT TCATCAAGGT TGGCAGCCAG GTGACTGTCA GCGACCTGCT GCACGGCATC
ATCATTCAGT CCGGTAACGA CGCCTCGGTC GCCTTGTCCG AGCACATCGC CGGCAGCGAA
GATGCGTTTG CCGACATGAT GAACAAGACG GCTGCCGACC TGGGCATGAC CAACAGCCAC
TTCATGAACC CGACTGGCCT GCCGAACCCG GAGCACTACT CGTCGGCGCA CGACATGGCG
ACCCTGGCCC GCGCGATCAT CACCGTCGAC CCGGCTCACT ACGCGATCTA CTCGCAGAAA
GAGTTCTTCT GGAACAACAT CAAGCAGCCC AACCGCAACC TGCTGCTGTG GCGTGACAAG
ACCGTCGATG GCCTGAAAAC CGGCCACACC GACGAAGCCG GCTACTGCAT GGTGGCTTCG
GCCGTTCGTG ACGGCCAGCG CCTGATCGCC GTGGTGTTCG GCACCAACAG CGAGCAGTCG
CGTGCTGCCG AGACCCAAAA GCTGCTGACC TATGGCTTCC GCTTCTTCGA AACCCAGACC
TTCTACCAGA AGGGCACCGA GCTGACCCAG GCTCCGGTCT GGAAGGGCGC CACCGGCCAG
ATCAAGGCTG GCCTGGCTGA CGACCTCACC ATGACTATGC CTAAAGGCCA ATTGAAGCGC
CTGCAGGCTT CGATGACCAT GAACCCGCAG CTCACCGCAC CGATCGCCAA AGGTGACGTG
ATCGGCAAAG TGGAAGTCAA ACTGGACGAG AAAGTGGTTC ACAGCGCCGA CCTGATCGCC
CTCGATGGCG TCGAGGAAGG TGGTTTCTTC CGCCGTATGT GGGATAGCAT CCGTCTATTC
TTCTACGGGT TGTTCAACTG A
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| Protein sequence | MNITNLAKRL CLPVLLMITP AAFAAEQMTP APPQLAAKSY VLMDASSGNV LVENNGDERL
PPASLTKLMT AYIATLDIRR GQIGENDPVT VSENAWRTGG SRMFIKVGSQ VTVSDLLHGI
IIQSGNDASV ALSEHIAGSE DAFADMMNKT AADLGMTNSH FMNPTGLPNP EHYSSAHDMA
TLARAIITVD PAHYAIYSQK EFFWNNIKQP NRNLLLWRDK TVDGLKTGHT DEAGYCMVAS
AVRDGQRLIA VVFGTNSEQS RAAETQKLLT YGFRFFETQT FYQKGTELTQ APVWKGATGQ
IKAGLADDLT MTMPKGQLKR LQASMTMNPQ LTAPIAKGDV IGKVEVKLDE KVVHSADLIA
LDGVEEGGFF RRMWDSIRLF FYGLFN
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