| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4849 |
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| Symbol | holA |
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| ID | 5872662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5416211 |
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| End bp | 5417266 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641549985 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_001671069 |
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| Protein GI | 167035838 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCCGCC TGTTCCCCAT GAAGCTCGCC CCCGCCCAAC TCAACAAGCA CCTGCAAGGC
GCCCTGGCAC CGGTCTACGT GGTCAGCGGC GACGACCCGC TGCTGTGCCA GGAAGCCGCC
GACGCCATCC GCAATGCCGC GCGGCAGCAA GGTTTCGACG AACGCCAGGT ATTCAGTGCC
GACGCCAACT TCGACTGGGG CACGCTGCTC CAGGCTGGCG CCAGCCTCTC GCTGTTCGCC
CAACGCCGCC TGCTGGAACT GCGCCTGCCC TCGGGCAAGC CCGGTGACAA GGGCGCCGCC
GCGCTGATGG AGTACTGCGC CAACCCTGCC GAAGACACCC TGCTGCTGAT CAGCCTGCCC
AAGCTCGACG GCAGTGCGCA GAAGACCAAG TGGGGCAAGG CATTGATCGA AGGCGCCCAC
TGCCAGTTCA TCCAGATCTG GCCGGTGGAT GTGCACCAGT TGCCGCAGTG GATCAACCAG
CGCCTGCAAC AGGCCGGTTT ATCAGCACAG CGTGACGCCG TCGACCTGAT TGCCGCCCGT
GTGGAAGGCA ACCTGCTGGC AGCCGCGCAG GAAATCGAAA AGCTCAAATT GCTGGCCGAA
GGCAGCCAGA TCACCGTGGA AACCGTGCAG GCCGCCGTGG CCGACAGTGC CCGCTTCGAT
GTTTTCGGCC TGGTCGATGC CATTCTCAAC GGCGAAGCTG CACATGCGCT GCGCATGCTC
GAAGGCTTGC GCGGTGAGGG TGTGGAGCCG CCAGTCATCC TCTGGGCCCT GGCCCGCGAG
CTGCGTCAGC TGGCTGGGTT GGCCCAACAG TTCAGCCAGG GCGTGCCGCT GGACAAAGCC
TTCAGCCAGG CCCGCCCGCC TGTCTGGGAC AAACGCAGGC CGCTGGTCAG CAAGGCCCTG
CAGCGCCTCT CGGCGCAGCG CTGGGCGCAG TTGCTGCAGG ACGCCCAGCG CATCGATGCG
CAAATCAAGG GCCAGGCCGA GGGATCGCCC TGGACGGGCC TGGCGCGGCT ATCACTGTTG
ATGGCTGGGC AGCGCCTGAC CCTCCCCCCT GAGTAA
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| Protein sequence | MPRLFPMKLA PAQLNKHLQG ALAPVYVVSG DDPLLCQEAA DAIRNAARQQ GFDERQVFSA
DANFDWGTLL QAGASLSLFA QRRLLELRLP SGKPGDKGAA ALMEYCANPA EDTLLLISLP
KLDGSAQKTK WGKALIEGAH CQFIQIWPVD VHQLPQWINQ RLQQAGLSAQ RDAVDLIAAR
VEGNLLAAAQ EIEKLKLLAE GSQITVETVQ AAVADSARFD VFGLVDAILN GEAAHALRML
EGLRGEGVEP PVILWALARE LRQLAGLAQQ FSQGVPLDKA FSQARPPVWD KRRPLVSKAL
QRLSAQRWAQ LLQDAQRIDA QIKGQAEGSP WTGLARLSLL MAGQRLTLPP E
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