Gene PputGB1_4843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4843 
Symbol 
ID5872656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5408986 
End bp5409825 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content60% 
IMG OID641549979 
ProductCBS domain-containing protein 
Protein accessionYP_001671063 
Protein GI167035832 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4535] Putative Mg2+ and Co2+ transporter CorC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.71601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG ATCGATCGAG CAACGGGCAG AAGTCCTGGT TGGGTAAACT GACCCAGGCT 
TTTGCCCATG AGCCGAAAAA CCGCCAGGAG CTGCTTGAGC TGCTGCGCGA AGCCCATCAG
AACAAACTGC TGGACAGCGA AGCACTGACC ATCGTCGAAG GCGCCATCCA GGTCGCCGAC
CTGCAGGTGC GCGACATCAT GGTGCCGCGC TCGCAGATGA ACAGCATCAA GGCAGGTCAG
TCGCCACGCG AGTTCCTGCC GGCGGTGATC GACGCCGCGC ACTCGCGCTA CCCGGTCATC
GGCGAAAGCC ATGACGATGT GCTCGGGATC CTGCTCGCCA AAGACCTGCT GCCGTTGATC
CTCAAGGAGA ACGGCGACAG CTTCAACATC AAGGACCTGC TGCGCCCGGC CACCTTCGTG
CCCGAGTCCA AGCGCCTGAA CGTGTTGCTG CGCGAGTTCC GCGCCAACCA TAACCACATG
GCCATCGTCA TCGACGAATA TGGCGGTGTA GCGGGCCTGG TCACCATCGA GGACGTGCTT
GAGCAGATCG TCGGCGACAT CGAGGACGAG CACGACGTCG AGGAAGACAG CTACATCAAG
CCGCTGCCCA GCGGTGATTT CCTGGTCAAG GCGCTTACCC CGATCGAGAA CTTCAACGAG
TTCTTCGACA GCGAGTTCTC CGATGACGAG TTCGACACGG TCGGCGGCCT GGTGATGAGC
GCCTTTGGCC ACCTGCCCAA GCGCAACGAA ACCACCGAGA TCGGGTCTTA CAAGTTCCGT
ATTCTCAACG CCGACAGCCG GCGGATACAC TTACTGCGCC TGACCCCGAT CACCCGTTAA
 
Protein sequence
MSEDRSSNGQ KSWLGKLTQA FAHEPKNRQE LLELLREAHQ NKLLDSEALT IVEGAIQVAD 
LQVRDIMVPR SQMNSIKAGQ SPREFLPAVI DAAHSRYPVI GESHDDVLGI LLAKDLLPLI
LKENGDSFNI KDLLRPATFV PESKRLNVLL REFRANHNHM AIVIDEYGGV AGLVTIEDVL
EQIVGDIEDE HDVEEDSYIK PLPSGDFLVK ALTPIENFNE FFDSEFSDDE FDTVGGLVMS
AFGHLPKRNE TTEIGSYKFR ILNADSRRIH LLRLTPITR