Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4843 |
Symbol | |
ID | 5872656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5408986 |
End bp | 5409825 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641549979 |
Product | CBS domain-containing protein |
Protein accession | YP_001671063 |
Protein GI | 167035832 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4535] Putative Mg2+ and Co2+ transporter CorC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.71601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAAG ATCGATCGAG CAACGGGCAG AAGTCCTGGT TGGGTAAACT GACCCAGGCT TTTGCCCATG AGCCGAAAAA CCGCCAGGAG CTGCTTGAGC TGCTGCGCGA AGCCCATCAG AACAAACTGC TGGACAGCGA AGCACTGACC ATCGTCGAAG GCGCCATCCA GGTCGCCGAC CTGCAGGTGC GCGACATCAT GGTGCCGCGC TCGCAGATGA ACAGCATCAA GGCAGGTCAG TCGCCACGCG AGTTCCTGCC GGCGGTGATC GACGCCGCGC ACTCGCGCTA CCCGGTCATC GGCGAAAGCC ATGACGATGT GCTCGGGATC CTGCTCGCCA AAGACCTGCT GCCGTTGATC CTCAAGGAGA ACGGCGACAG CTTCAACATC AAGGACCTGC TGCGCCCGGC CACCTTCGTG CCCGAGTCCA AGCGCCTGAA CGTGTTGCTG CGCGAGTTCC GCGCCAACCA TAACCACATG GCCATCGTCA TCGACGAATA TGGCGGTGTA GCGGGCCTGG TCACCATCGA GGACGTGCTT GAGCAGATCG TCGGCGACAT CGAGGACGAG CACGACGTCG AGGAAGACAG CTACATCAAG CCGCTGCCCA GCGGTGATTT CCTGGTCAAG GCGCTTACCC CGATCGAGAA CTTCAACGAG TTCTTCGACA GCGAGTTCTC CGATGACGAG TTCGACACGG TCGGCGGCCT GGTGATGAGC GCCTTTGGCC ACCTGCCCAA GCGCAACGAA ACCACCGAGA TCGGGTCTTA CAAGTTCCGT ATTCTCAACG CCGACAGCCG GCGGATACAC TTACTGCGCC TGACCCCGAT CACCCGTTAA
|
Protein sequence | MSEDRSSNGQ KSWLGKLTQA FAHEPKNRQE LLELLREAHQ NKLLDSEALT IVEGAIQVAD LQVRDIMVPR SQMNSIKAGQ SPREFLPAVI DAAHSRYPVI GESHDDVLGI LLAKDLLPLI LKENGDSFNI KDLLRPATFV PESKRLNVLL REFRANHNHM AIVIDEYGGV AGLVTIEDVL EQIVGDIEDE HDVEEDSYIK PLPSGDFLVK ALTPIENFNE FFDSEFSDDE FDTVGGLVMS AFGHLPKRNE TTEIGSYKFR ILNADSRRIH LLRLTPITR
|
| |