| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4832 |
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| Symbol | |
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| ID | 5872645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5397163 |
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| End bp | 5397801 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641549968 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001671052 |
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| Protein GI | 167035821 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTGC CACCCCGTAA CAAGCCGCGC CGTCCCCAGG CGCGGCCTGC CACCGGCCCG
CGTCGCCAGG CCAAGGCGCC ACCGGCCGAG CCGCGCCTGA TCCTGTTCAA CAAGCCGTTC
GACGTGCTGA CCCAGTTCAG CGACTGCGAA GGGCGCGCGA CCCTCAAAGA CTTCATCGAC
ATCGCGGGCG TGTACCCGGC CGGTCGGCTG GACCGCGACA GTGAAGGCCT GCTGTTGCTG
ACCAACGATG GCGGGCTGCA GGCGCGGATT GCCGACCCCA AGCACAAGTT GGCCAAGACT
TACTGGGTAC AGGTGGAGGG CGAACCGAGC GACGAGCAGT TGCAGCGCTT GCGTGACGGT
GTGGAACTGA ACGATGGGCC GACCTTGCCG GCCGAGGCGC GGCGGCTGGA AGAACCCGAG
CTATGGCCGC GCAACCCGCC TGTACGCTTT CGCAAGAGCG TGCCGACCAG CTGGCTGGAA
CTTGTGATCC GGGAGGGGCG TAACCGCCAG GTGCGGCGGA TGACGGCAGC GGTGGGGTTG
CCGACCTTGC GCCTGGTGCG GGTGAGGATT GGCGATTGGG CGCTGGATGG GCTGGAGCAG
GGTTGCTGGC GCGAAGTCCC GGCAAAATTA AAGCGCTAG
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| Protein sequence | MSLPPRNKPR RPQARPATGP RRQAKAPPAE PRLILFNKPF DVLTQFSDCE GRATLKDFID
IAGVYPAGRL DRDSEGLLLL TNDGGLQARI ADPKHKLAKT YWVQVEGEPS DEQLQRLRDG
VELNDGPTLP AEARRLEEPE LWPRNPPVRF RKSVPTSWLE LVIREGRNRQ VRRMTAAVGL
PTLRLVRVRI GDWALDGLEQ GCWREVPAKL KR
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