Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4828 |
Symbol | |
ID | 5872641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5394258 |
End bp | 5395130 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641549964 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_001671048 |
Protein GI | 167035817 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACCA CCCCGGCTGA ACACCAGCGC CTGCTACGCC TGGCCACGCG CGCGTCATTG GCGGTGGCCA GTATTCTGGT GCTGAGCAAG GCGCTGGCCT GGTGGCTGAG CGGTTCGGTG AGCCTGCTGG CCGGGCTGAC CGATTCGGCA CTGGACGCTG TGGCCTCGTT CCTCAACCTG CTGGCGGTGC ATTATGCGCT GCGCCCGGCA GACGACGATC ACCGGTTCGG CCATGGCAAG GCCGAGGCCC TGGCCGGCAT GGCGCAGGCG CTGTTCATCG GGGTCAGTGC AGTGCTGATC GGCGTGCAGG CGGTCGAGCG CCTGCACACC CCGCAACCGC TGGGTGATAC CGCCATCGGC ATCGCGGTGA TGCTGCTGTC GCTGGTGCTG ACCGTCGCCC TGCTGGCCTT GCAGTACAAG GTCATCCGCC TGACCGGCTC TACCGCGGTG CGGGCCGACT CCCTGCACTA CCGCTCGGAC TTGCTGCTAA ACAGCAGCAT CCTGCTGGCC CTGCTGCTGG CGCGTTTCGG CTGGCCCCAG CTGGATGCGC TGTTCGGCCT GGGCATCGCC TTTTACATCC TCTGGAGTGC CTTGCAGATT GCCCGCGAAA GCACGGCAAT CCTGATGGAC AAGGAACTGC CCAGCGATGT CGGCGAAGAC ATGGCCACGC GGGTACTGGC CATTCCCGGC GTCAAGGGCG TGCACGACCT GCGTACGCGG GTGTCGGGCA ACCAGTGGTT CGTGCAGTTG CACCTGGAGC TACCAGGGCA GCTACCACTG CATGAAGCAC ACGGATTGTG CGTGGAGGCC TCACGGGTGA TCCGCCAGCG TTATCCACAG GCGGATGTGA TGGTGCACGC CGACCCGGTA TAG
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Protein sequence | MITTPAEHQR LLRLATRASL AVASILVLSK ALAWWLSGSV SLLAGLTDSA LDAVASFLNL LAVHYALRPA DDDHRFGHGK AEALAGMAQA LFIGVSAVLI GVQAVERLHT PQPLGDTAIG IAVMLLSLVL TVALLALQYK VIRLTGSTAV RADSLHYRSD LLLNSSILLA LLLARFGWPQ LDALFGLGIA FYILWSALQI ARESTAILMD KELPSDVGED MATRVLAIPG VKGVHDLRTR VSGNQWFVQL HLELPGQLPL HEAHGLCVEA SRVIRQRYPQ ADVMVHADPV
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