Gene PputGB1_4828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4828 
Symbol 
ID5872641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5394258 
End bp5395130 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content66% 
IMG OID641549964 
Productcation diffusion facilitator family transporter 
Protein accessionYP_001671048 
Protein GI167035817 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCA CCCCGGCTGA ACACCAGCGC CTGCTACGCC TGGCCACGCG CGCGTCATTG 
GCGGTGGCCA GTATTCTGGT GCTGAGCAAG GCGCTGGCCT GGTGGCTGAG CGGTTCGGTG
AGCCTGCTGG CCGGGCTGAC CGATTCGGCA CTGGACGCTG TGGCCTCGTT CCTCAACCTG
CTGGCGGTGC ATTATGCGCT GCGCCCGGCA GACGACGATC ACCGGTTCGG CCATGGCAAG
GCCGAGGCCC TGGCCGGCAT GGCGCAGGCG CTGTTCATCG GGGTCAGTGC AGTGCTGATC
GGCGTGCAGG CGGTCGAGCG CCTGCACACC CCGCAACCGC TGGGTGATAC CGCCATCGGC
ATCGCGGTGA TGCTGCTGTC GCTGGTGCTG ACCGTCGCCC TGCTGGCCTT GCAGTACAAG
GTCATCCGCC TGACCGGCTC TACCGCGGTG CGGGCCGACT CCCTGCACTA CCGCTCGGAC
TTGCTGCTAA ACAGCAGCAT CCTGCTGGCC CTGCTGCTGG CGCGTTTCGG CTGGCCCCAG
CTGGATGCGC TGTTCGGCCT GGGCATCGCC TTTTACATCC TCTGGAGTGC CTTGCAGATT
GCCCGCGAAA GCACGGCAAT CCTGATGGAC AAGGAACTGC CCAGCGATGT CGGCGAAGAC
ATGGCCACGC GGGTACTGGC CATTCCCGGC GTCAAGGGCG TGCACGACCT GCGTACGCGG
GTGTCGGGCA ACCAGTGGTT CGTGCAGTTG CACCTGGAGC TACCAGGGCA GCTACCACTG
CATGAAGCAC ACGGATTGTG CGTGGAGGCC TCACGGGTGA TCCGCCAGCG TTATCCACAG
GCGGATGTGA TGGTGCACGC CGACCCGGTA TAG
 
Protein sequence
MITTPAEHQR LLRLATRASL AVASILVLSK ALAWWLSGSV SLLAGLTDSA LDAVASFLNL 
LAVHYALRPA DDDHRFGHGK AEALAGMAQA LFIGVSAVLI GVQAVERLHT PQPLGDTAIG
IAVMLLSLVL TVALLALQYK VIRLTGSTAV RADSLHYRSD LLLNSSILLA LLLARFGWPQ
LDALFGLGIA FYILWSALQI ARESTAILMD KELPSDVGED MATRVLAIPG VKGVHDLRTR
VSGNQWFVQL HLELPGQLPL HEAHGLCVEA SRVIRQRYPQ ADVMVHADPV