Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4824 |
Symbol | |
ID | 5872637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5392187 |
End bp | 5392555 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641549960 |
Product | ISPs1, transposase OrfA |
Protein accession | YP_001671044 |
Protein GI | 167035813 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGGC GTTACGAACT TTCTGATGCG TCATGGGAGC TGATCAAGGA TTTGGTTTCT CCAGAACAGA AAATGGGCCG TCCTCGCAAC GATGATCGTC AGGTTCTCCA CGGAATTCTG TGGATCCTGT GCTCGGGCGC TCCCTGGCGC GACCTGCCTG AACGCTTTGG GCCTTGGTCA ACGGTGTATC AGCGTTTTCG TGACTGGCGC GACGACGGCA CATTCGAGCG AGTACTGGAG CGTCTGCATA TTCGGCTGAA CCGGGAAGGA CTGATCGACT TGGACACCTG GATGATCGAC TCCACCGCAG TACGAGCAAC CCGAGCCTCT TCAGGCGCCG GGGAAAAGGG GGGCCTGAAG AACCGTTAG
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Protein sequence | MARRYELSDA SWELIKDLVS PEQKMGRPRN DDRQVLHGIL WILCSGAPWR DLPERFGPWS TVYQRFRDWR DDGTFERVLE RLHIRLNREG LIDLDTWMID STAVRATRAS SGAGEKGGLK NR
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