| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4808 |
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| Symbol | |
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| ID | 5872622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5375561 |
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| End bp | 5378095 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641549946 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_001671030 |
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| Protein GI | 167035799 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCGT TGCCAATCAA CGCCGCGTTG CCGGCCCTTC TGAAAGCCCT CCAAGAGCGA
GATGAGGTAG TGCTCCAGGC ACCGCCTGGC GCCGGTAAAA CGACTCGCGT CCCGCTTGCC
TTGCTCAGTG AACCATGGCT CCAAGGGCAG ACGATCATCA TGTTGGAACC TCGCCGGCTC
GCAGCCCGAG CTGCTGCCGA GCGCATGGCG AACGAGCTAG GTGAGAAGGT CGGTGAGACC
GTTGGCTATC GCATCCGCCT CGACAGCAAA GTTGGGCCGA AGACGCGGAT CGAGGTGGTG
ACCGAAGGAA TACTGACGCG TCGTCTGCAG AGCGATCCTT CGCTCGAAGG TGTTGGCTTG
GTGATCTTCG ACGAATTCCA TCTGAGAAAT CTAGATGCCG ATCTCGCCTT GGCCCTGACG
CTCAATGGTC GCGAGCTTTT CAGGGACGAT GCACCGCTGA AGGTGCTGCT GATGTCGGCA
ACGCTGGAAG GTGAAAGGCT GTCCCGCCTG CTGGATGACG CACCGATCGT GACGAGCGAA
GGACGCATGT TCCCTGTCTC GACAGTCTGG GGAAAACCTC AGCAACCTGG AGAATACATC
GAGCCGCGAG TCATCAGTGC GTGCCTTGAA GCACTTGCTG ATCAGACTGG TAGCTTGCTT
GTTTTCCTCC CTGGTCAAGC CGAGATCCGT CGAGTCATGA CAGGCCTGGA AGATGCTTTG
ACCCAGTCAC CATCACTTCA GCGTGACGTT CTTCTTTGCC CCCTTCATGG TGAACTCGAT
CTAAATCAGC AGCGGGCTGC GATTGATCCG GCGCCGGCAG GAAAGCGGAA GGTTGTGCTG
GCCACAAACA TCGCTGAGAC CAGTGTCACC ATCGACGGTG TGCGGGTCGT GATCGATGCC
GGCCTTGAGC GGGTTCCACG CTTCGATCCT CGTAGTGGGA TGACGCGACT CGATACTCAG
CGAATTTCAA AGGCTAGTGC AACTCAACGA GCAGGTCGGG CAGGTCGAGT CGAGCCCGGT
ATGTGCTATC GACTCTGGTC TGAGACGCAG CATGACCAAA TGGCTTCTTT CAGCTCGCCT
GAAATTCAGC AGGCTGACCT CACTGGCTTG GCGCTTCAAC TGGCCAAATG GGGCGTTCAG
CCGGGCGACC TAAAGTGGCT TGATGCTCCG CCCGCAGCTG CTTACTCCCA AGCCAACTAC
TTGCTTCGGC GCCTTGGCGC ATTACAGCCT GATGGGCAAC TGACAAAGCA CGGCCAAGCG
ATGGCCGAGC TGCCAAGCCA CCCTCGAATC GCTCACCTCC TGCTGAGAGG TCATGAGCTG
GGCCTGGCTG AGACTGCCTG CAACATCGCA GCCCTGCTCG GTGAGAGGGA TATTCAGCGT
GGTGGTGGGG CAGACCTTCA CAGCCGTTTG GCCATCTTGT CTGGTGAGCA ACGTGCTCAG
CGCAATGAGC AGGGGGTCGC GCAGCGGGCG AAGCAATTGG CTAAGCAGTA CCGCTCATAT
TTGCGTGGCC CAGCATCGCA ACCAGTCGCT GATTCAGACG ACCCGAAGTG GGTCGGCTGC
CTACTTGCCT TGGCGTACCC AGATCGCGTC GCACAGCAAC GTCGAGCGGG TGGGGCTGAG
TATCGCTTGG CGAACGGTCG AGCAGCGATG TTCACCGAAG CTGATGCACT GATGAAGCAT
TCATGGCTGG TGATCGCCGA CTTGGGTAGC AGGCAAGGCC AACGCGAAGA GCGGATCTAC
CTCGCCTCCG ACTTGGACGA AGCCTTGTTT GATACTGTCT TGAAAGACCA GGTCACCCAG
GTGGATGAAC TTGATTGGGA TGAGCGGGAG GGGGCACTCC GCGCTGAGCG ACAAGTGAAA
GTAGGGGAGT TGATTCTGTC TCGCGCGCCA TTGTCCGACC TAAGCGATGA AGCGCGCGTT
CAGGCTTTGC TCAACTGCGT TCGCCGGAAG GGTCTGCAGC TTTTGTCCTG GACACCTGAA
TTGCGTCAGT GGCAGGCGAG GGTGGAGCTG CTGCGCCTGT TGGATGAAGA GTCGGGTAAG
CAGAGCGAGT GGCCCGATCT TCGTGATGAA GCCTTGCTAG TGTCGCTTGA GGATTGGCTC
GGCCCCTATG TCGGTAAGGT CACGCGGCTT AGTCATTTTG GTCAGCTCGA TCTGTCCTCT
ATTATCCGCA ACCTGCTGCC GTGGCCACTT CCGCAGCAGT TGGATGCGCA GGCGCCCCAG
ACGGTTTCGG TACCGTCCGG GTCGAATATT CGAATCGACT ACAGTGAGCG TCCGCCGGTT
CTCGCAGTGA GACTGCAGGA GCTGTTCGGG CAAGCTGACA CGCCACGCAT CGCAAATGGG
CGACAGGTAC TCAAGCTGCA TCTTCTGTCC CCGGCGCGTC GTCCAGTGCA GGTAACTCAG
GATTTGGCGA ACTTTTGGGC TTCAACCTAC GCCGAGGTGA AAAAGGATTT GAAGGGTAGA
TACCCAAAGC ATTTTTGGCC CGATGATCCA TTGGTAGCTG AAGCAACATC GCGAGCTAAA
CCTAGGGGAA CTTGA
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| Protein sequence | MSSLPINAAL PALLKALQER DEVVLQAPPG AGKTTRVPLA LLSEPWLQGQ TIIMLEPRRL
AARAAAERMA NELGEKVGET VGYRIRLDSK VGPKTRIEVV TEGILTRRLQ SDPSLEGVGL
VIFDEFHLRN LDADLALALT LNGRELFRDD APLKVLLMSA TLEGERLSRL LDDAPIVTSE
GRMFPVSTVW GKPQQPGEYI EPRVISACLE ALADQTGSLL VFLPGQAEIR RVMTGLEDAL
TQSPSLQRDV LLCPLHGELD LNQQRAAIDP APAGKRKVVL ATNIAETSVT IDGVRVVIDA
GLERVPRFDP RSGMTRLDTQ RISKASATQR AGRAGRVEPG MCYRLWSETQ HDQMASFSSP
EIQQADLTGL ALQLAKWGVQ PGDLKWLDAP PAAAYSQANY LLRRLGALQP DGQLTKHGQA
MAELPSHPRI AHLLLRGHEL GLAETACNIA ALLGERDIQR GGGADLHSRL AILSGEQRAQ
RNEQGVAQRA KQLAKQYRSY LRGPASQPVA DSDDPKWVGC LLALAYPDRV AQQRRAGGAE
YRLANGRAAM FTEADALMKH SWLVIADLGS RQGQREERIY LASDLDEALF DTVLKDQVTQ
VDELDWDERE GALRAERQVK VGELILSRAP LSDLSDEARV QALLNCVRRK GLQLLSWTPE
LRQWQARVEL LRLLDEESGK QSEWPDLRDE ALLVSLEDWL GPYVGKVTRL SHFGQLDLSS
IIRNLLPWPL PQQLDAQAPQ TVSVPSGSNI RIDYSERPPV LAVRLQELFG QADTPRIANG
RQVLKLHLLS PARRPVQVTQ DLANFWASTY AEVKKDLKGR YPKHFWPDDP LVAEATSRAK
PRGT
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