Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4782 |
Symbol | |
ID | 5872596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5348388 |
End bp | 5348867 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641549920 |
Product | hypothetical protein |
Protein accession | YP_001671004 |
Protein GI | 167035773 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAAGA TCGCGCTGTT CGCCGATGTG CAGAACCTCT ACTACACCGT GCGCCAGGCC CATGGCTGCC ATTTCAACTA CACCGCCCTT TGGGCCGACG TCAGCCGCGA AGGCCAGATC GTCGAAGCCG TGGCCTATGC CATCGACCGT GGCGACGCCA AGCAGCAACA GTTCCAGCAG ATTTTGCGCA ACCTCGGTTT CGACGTGCGT CTCAAACCCT TCATCCAGCG CAGCGATGGC TCGGCCAAAG GCGACTGGGA TGTGGGCATT ACCCTGGATG TAATCGACGC GGCAAGCAGG GTCGACCAGG TAGTGCTGGC TTCTGGCGAT GGTGATTTCG ACCTGCTGCT GGAGCGGGTG ATCCAGCGCC ATGGCACCGA AGCCGTGGTG TATGGCGTGC CGGGGCTGAC GGCGCTGTCA TTGATCCGTG CCGCCACCCG CTATGTGCCC ATCGAGGGCG CACTGTTGCT CAAACACTAA
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Protein sequence | MKKIALFADV QNLYYTVRQA HGCHFNYTAL WADVSREGQI VEAVAYAIDR GDAKQQQFQQ ILRNLGFDVR LKPFIQRSDG SAKGDWDVGI TLDVIDAASR VDQVVLASGD GDFDLLLERV IQRHGTEAVV YGVPGLTALS LIRAATRYVP IEGALLLKH
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