Gene PputGB1_4769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4769 
Symbol 
ID5872583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5335673 
End bp5336434 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID641549907 
ProductABC transporter related 
Protein accessionYP_001670991 
Protein GI167035760 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.530136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGT TGATCGAGGG TGTTTCGGTG GCCTACGGCG CGCGGCAGAT CCTGCAGGGG 
GTGAGCCTGC CGGCGTTGCC GGCCGGCAGC CTGGTAGCGC TGGTCGGGCC AAATGGTGCG
GGCAAATCCA CGTTGTTGCG TGCCTTGGCA GGGCTGGAGC GGATGCGCGG TGGTTTGCGC
CTGGATGGGC AGGATGTGAC GCGCCTGGGC TTTGCCGAGC GCTCACGTCG CCTGGCCTAT
ATGCCCCAGC AGCTACCGCC GGGTATCGCC TTGGGCGTAT TGGAAAGCAT TGTTGCGGCC
TTGCGCGTGA GCGCTGGCAG CGATCTGCTG GGCAGCGCCT TCGATGCGTT GCGCCAGTTG
GGCATCGAGG GTTTGGCCGA GCGCTCGCTG GACAGTTTGT CTGGCGGGCA ACGGCAGCTG
GTGGCCTTGG CCCAGTTGCT GGCACGCAAC CCACAGGTGC TGTTGCTGGA CGAGCCGACC
AGTGCGCTGG ACCTGCATTA CCAGTTGCGG GTGATGGGCG CTGTGCGCGA ACGCGTGCAG
GCGCATCGGT TGCTGGCGGT GGCGGTGCTG CATGACATCA ACCTGGCAGC CAGCCACGCA
GATTGGCTGG TGGTGTTGCG TGAGGGCAGG GTGGTGGCCT GCGGGGCGCC GGGGGATGTG
CTGCAGCCGG GGCTGTTGGC TGAGGTGTAT GGCGTGGTGG CCCGGGTGGA GCGCTGTTCG
CAGGGGCGCC TGCAGGTGCT GGTGGACCGG GCGTTGGCTT GA
 
Protein sequence
MSLLIEGVSV AYGARQILQG VSLPALPAGS LVALVGPNGA GKSTLLRALA GLERMRGGLR 
LDGQDVTRLG FAERSRRLAY MPQQLPPGIA LGVLESIVAA LRVSAGSDLL GSAFDALRQL
GIEGLAERSL DSLSGGQRQL VALAQLLARN PQVLLLDEPT SALDLHYQLR VMGAVRERVQ
AHRLLAVAVL HDINLAASHA DWLVVLREGR VVACGAPGDV LQPGLLAEVY GVVARVERCS
QGRLQVLVDR ALA