| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4761 |
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| Symbol | |
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| ID | 5872575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5324255 |
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| End bp | 5326648 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549899 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001670983 |
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| Protein GI | 167035752 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCGA CCCCGGTTCC ACAGCGCCAC CCATTGAGTC GTGCTGTGCA CGGTGCTTTC
CTGGGCCTGG TTGTCAGTAG CTGTGCGCTG CCTGCCCTTG CGCAATCTGC AACTGCTGAA
CACAGCAACC AGGCGCAGCA ATGGAACATT CCTGGCGGCC CACTGGCGCC GGCGCTTGAC
CGCTTTGCAC GCCAGGCGGG CATTAGCCTG TCCTTCGACG CGCAGCGCAT AGCCGACCGC
AACACGGCAG GTGTGCAAGG TACGCTGGGC ATGTCGGCGG CACTCTCGCA GTTGTTGCAG
GGGACCGAGC TTCAGGCGCA GCAGCAAGGC CCCAGTGCTT ATCTGGTGGT ACCGCAGCCC
AAGCCTGCCG GCCCGCTGGA GCTGGGGGCG ACCGAGGACT ACCGCCTGGC GCCCGTCATC
ATCAATGCCA AGGTCAAAGC CAGCGCCGAC GAAGACAGCA ACTCGGTGGT TGCCAAGGAG
CTGTGGGTAG GCGGCAAGGT GGCGACCAGC ATCCTCAACA CGCCAGCCTC CGTGTCTGTG
GTGACCAACA AGGAAATGCA GCAGCGCAGC GTCAGCACAA CCGAAGAGGC GCTGCAGTAC
ACCCCCGGCG TGGTCAGCGA CTACTACGGT TCGGACGACC GCAACGATTA CTTCCTGATC
CGCGGCTTTC AGGCCACCAC CTACCGTGAC GGCCTGACCC TCAGTTCGAT GCGCGGTGTG
CGTGAAGACC CTTACGCCTA CGAGCGCATA GAAATTCTGC GTGGTGCCAA CTCCACGCTG
TTCGGCCCGG CAGACCCAGG TGGCTCGGTC AACTTCGTGA CCAAGCAACC GCGCTTCGAG
AAGTTTGGCC AGGGCTACGT GACCTACGGC TCCTACAACC ATGCCGAAAC CGGTATCGAT
GTAGGCGATG CCCTGAACGA CGAACAAACC CTGGCCGGCC GCTTCACGGC CAAGATGCAG
AACAGCGACC GCGAGTACGA CCACTCCCAG GACGACAACC GGTTCGTGAT GGGCGGCCTG
ACCTGGGCGC CCACCGACTT CACCTCGGCC ACCATGGTGC TCGACTACCT GAAAACCGAT
AGCTCGCCGA ACAGTGGCGG CTACCCGCTG GACAAGGAAT ACGACCGCAG CGATTTCTAT
GGCGAGCCCA GCTACAACTT CCACAATGTG GAGCGCACCA GCCTCAGCGG CAACATCACC
CACGACTTCG ACAATGGCTT CGTATTGCGC AGCAACCTGC GTTACAGCGA GCTGAGCGAT
GACTTTGGCT ACGCGTACCT GAGCGACAGC ACCTCGCGTG TCGGCACTAC GATTCCACGC
TACATCTTCG GCACCGACAG TGATGCCGAT CAGCTCAATG GCAACCTGAT GCTGCAGTAC
GATGCCCAAT TCGAGCATAT CGACAGCAGC ACCCTGGTGG GCGTGGAGTA CCTCGACTCG
ACGACCAAGC AGAGTTCGGT CTACGGCTTG GCGCCTTCCA TCGACATCGC CAACCCGGTA
TTCACCGGCG TGCCAGGCGG CATCACGCCC TATACCCGCA AGAAGAATGA TGCCACCACC
AAGGCGGTGT TCCTGCAGCA GAACCTGTCG TTCTTTGACC GCGTCATCGC CACCGCAGGC
GTGCGTAATG ACTCGATGGA CCTGTCCAGC AAGGAGTACA TCGGTGGCGA GCAGACGGAA
AAGGACAACT TCTCCGAAAC CTCTTATCGC GCGGCACTGA CCTATATCGT CAACGATGAA
GTCTCTACCT ATGTGAGCAT GGTGGAGTCC GTATCACCCC CGCAAGTTGG CGTTACGCCG
CAAACGGGCA GGCAGTATGA AGTGGGCGTG AAGTATTCGC CCTTGGGCAT GGACGCACTG
TTCTCGGCTG CCGTTTACGA CCTGACCCAG GAGAACGTGA CCATTGCCGT GGTGCTGCCA
AGCGGCATCA TCGAGCAGCA GACAGTGGGC GAGTCACGCG TGCGCGGTCT GGATCTGGAA
GCCAAGGCGC AAGTCACGCA AGACATCAGC GTGATCGGTG CTTACTCCTA CATGGAGTCC
GAGGTGCTGC GCGGGTCGTT GTGGAACGGC GACTCGCTCA AGGGCAATGA ATTTGCCACT
GCACCGAAGC ACACCGCATC GCTGTGGAGC TATTACGACG TACCGGGCAC GGATGTGAGC
GTGGGTCTGG GCGCGCGGTA CGTGGGTGCC TACTACATGG ATGCTGCCAA CACCAAGAAG
AGCGACGGCA CAACACTGTT CGACGCGGCG CTGAACTACA AGATCGCCAA GGGGACCGAC
CTGGCGCTGA ATGTCAGCAA CCTGTTCGAC GAGCAACATG TGGTTGGGTC GGGGACGGCG
AACTACTACA ACCCGGGGCG CGAAGTGACG GCCAAGTTGA GTTACAGCTG GTGA
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| Protein sequence | MSSTPVPQRH PLSRAVHGAF LGLVVSSCAL PALAQSATAE HSNQAQQWNI PGGPLAPALD
RFARQAGISL SFDAQRIADR NTAGVQGTLG MSAALSQLLQ GTELQAQQQG PSAYLVVPQP
KPAGPLELGA TEDYRLAPVI INAKVKASAD EDSNSVVAKE LWVGGKVATS ILNTPASVSV
VTNKEMQQRS VSTTEEALQY TPGVVSDYYG SDDRNDYFLI RGFQATTYRD GLTLSSMRGV
REDPYAYERI EILRGANSTL FGPADPGGSV NFVTKQPRFE KFGQGYVTYG SYNHAETGID
VGDALNDEQT LAGRFTAKMQ NSDREYDHSQ DDNRFVMGGL TWAPTDFTSA TMVLDYLKTD
SSPNSGGYPL DKEYDRSDFY GEPSYNFHNV ERTSLSGNIT HDFDNGFVLR SNLRYSELSD
DFGYAYLSDS TSRVGTTIPR YIFGTDSDAD QLNGNLMLQY DAQFEHIDSS TLVGVEYLDS
TTKQSSVYGL APSIDIANPV FTGVPGGITP YTRKKNDATT KAVFLQQNLS FFDRVIATAG
VRNDSMDLSS KEYIGGEQTE KDNFSETSYR AALTYIVNDE VSTYVSMVES VSPPQVGVTP
QTGRQYEVGV KYSPLGMDAL FSAAVYDLTQ ENVTIAVVLP SGIIEQQTVG ESRVRGLDLE
AKAQVTQDIS VIGAYSYMES EVLRGSLWNG DSLKGNEFAT APKHTASLWS YYDVPGTDVS
VGLGARYVGA YYMDAANTKK SDGTTLFDAA LNYKIAKGTD LALNVSNLFD EQHVVGSGTA
NYYNPGREVT AKLSYSW
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