Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4760 |
Symbol | |
ID | 5872574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5323281 |
End bp | 5324156 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641549898 |
Product | transcriptional regulator |
Protein accession | YP_001670982 |
Protein GI | 167035751 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCA AGCAATCCAT CGAGCAGGTA CGCTGGGACC TGGCACTTCG CTATCGTTTG ATCGAAACCG TTGCCTGGTG GGAAGGCCGG CTGACCACGG GCCACCTGAT GCAGAGCTTT GGCATCAGCC GCCAGCAGGC GTCGAAGGAC ATCAATACCT ACATCACCGA ACATGCGCCC GAAAACTTGA CGTATGACAA GCAGATCAAG GGCTATGTAC CGAGCGAGCA GTTCGAGCCG CTGTTCATCG ATAACAGCGC CAGCGCCTAT CTGCACCTGC TCTACCAGAA CAACGAACGG GCGCCGCACA TCGACGGGTT GGCACTGGCC TACGCGCACA CCCGTGTACT GGAGGTGCCT GACCGCCCCA TTCGGCCAGA GGTGCTGCGC CCATTGCTCA AGGCTTGCCG TGAAGGCCTG CGCCTGGAAA CCGAATACGT GTCCTTCAAC ACCCCCAACG TCGAGGTGCG CCTGATCGCC CCGCACACGC TGGTGTACAC CGGCATGCGC TGGCACGTGC GGGCCTACTG CGAAAAGAAC GGCCAATACC GCGACTTCGT CCTCAGCCGC CTGCGTGGGC AGCCAGACTT GCTCGACGCG TCGCCGAACA CGCGTGAGCA GGATGAAGAC TGGAATGTCG AGGTGCCGGT CATCTTCGCG CCTGATGGGC GGTTGAACAC GGCGCAGCAG GCAATCATCG AAACCGACTT CGGCATGACC GATGGCCAAT TGGTGGTGCC TAGCCGCAGG GCATTGGTGA AGTATGTGTT GCAGCGGTAT CAAATCGACC ACCGCAACAT GGCGATACTG CCCGAGGCCC AGCAACTGGT GGTGAGCAAC CTCCAGGAAC TGCAACCGTG GTTGATGAAG TACTGA
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Protein sequence | MKRKQSIEQV RWDLALRYRL IETVAWWEGR LTTGHLMQSF GISRQQASKD INTYITEHAP ENLTYDKQIK GYVPSEQFEP LFIDNSASAY LHLLYQNNER APHIDGLALA YAHTRVLEVP DRPIRPEVLR PLLKACREGL RLETEYVSFN TPNVEVRLIA PHTLVYTGMR WHVRAYCEKN GQYRDFVLSR LRGQPDLLDA SPNTREQDED WNVEVPVIFA PDGRLNTAQQ AIIETDFGMT DGQLVVPSRR ALVKYVLQRY QIDHRNMAIL PEAQQLVVSN LQELQPWLMK Y
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