| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4756 |
|---|
| Symbol | |
|---|
| ID | 5872570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 5315869 |
|---|
| End bp | 5316630 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641549894 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001670978 |
|---|
| Protein GI | 167035747 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACA ACTACCCAGA TGTATTTCTA GGTGAATTTA GAGGTCCAGA CATGCGCAAT
CTAATGGCAG AAACCATCAT TAACCAGCCA GGACTAAAAC AAACAATCGA AAACCAAAAT
AGAATCGACT TCTTACCCGA GCAGAGCCTT CAGTGGATAA CAAACAAAAA AAGACAGAAC
GCTTTTCTGA TGAAAAAGCT TATCGAAAAA AACGAGTTCA ACTACACAGG CATCCCCGAC
AACCTAACCG GCAGAGATCT AACCATTGCA GCAATTGACA TATGGCAAAT AGACAAAACT
AAAAAATCAG AAATCATCAA CCAAATGAGA TCTGAATGGG AAACCCATAC AGAATCTGAC
CACTTATTCA AATGGTTCGA CGACCCAGAC GAGAAGGAAA AACTGAATAC AGCATGGGAA
ATAACCAAAG ACAAATACTC ATTCTTGGTC TTTCATCAAA ACCAACCTCA AGAAAGAGAT
GACTTTATCA TTCTGCTTGA CTCTATACTT ATAACCACGC CAGAAAAAAT ACTGCTCATG
AACTCCATCA AGAAACGATG GAGCCAGAAT AAATATCGCG CTAAAAATAC TGGAAAAAAA
CAGTACAACT TTATCCTATC CGACAAAACC ATCAAGCGCC TTGACAAGCT AGCCGACAAA
CATGACCTAA AGCGAACTCA AGTCTTGGAT ATACTGCTAA AAATGGAGGA GGAGAAAGGA
ATTTACATCC AAGAAAGACT AAAACAACTA GTCGACAGCT AA
|
|---|
| Protein sequence | MKYNYPDVFL GEFRGPDMRN LMAETIINQP GLKQTIENQN RIDFLPEQSL QWITNKKRQN
AFLMKKLIEK NEFNYTGIPD NLTGRDLTIA AIDIWQIDKT KKSEIINQMR SEWETHTESD
HLFKWFDDPD EKEKLNTAWE ITKDKYSFLV FHQNQPQERD DFIILLDSIL ITTPEKILLM
NSIKKRWSQN KYRAKNTGKK QYNFILSDKT IKRLDKLADK HDLKRTQVLD ILLKMEEEKG
IYIQERLKQL VDS
|
|---|
| |