Gene PputGB1_4750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4750 
Symbol 
ID5872564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5308900 
End bp5309745 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content60% 
IMG OID641549888 
ProductHNH endonuclease 
Protein accessionYP_001670972 
Protein GI167035741 
COG category[V] Defense mechanisms 
COG ID[COG3183] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.742551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGGCAG AGCGCGTTTC GGCAGAAACA GGCCTTGCAT TCACCGGCTC GGAGGGGCGG 
GACGCTGACG GCAGTCGCTG GTTTGAATTG TTGCCGGCAG AGCACCCTGC TGGTCAGACG
TTCACGCTTC GTACTGTCGT GGGGTGGCGT CGGATTGACG TGCATTTTCG ACCGGGTAAC
TTTGCCGGTG ACCTCATGGC AGCGATGGGG GCGGTCGACG AAGCAGGCCG TCGCACCTTC
TGCACCGTGC TGGGCGCCTG TCGAGAGGCG GGTGCGGAAG TCTTTCTTAA GGTCAACGGC
ACCGCCAGCG ATCTCGGAGA TGAAACGATT TGGGCTGTCC CATGGAGAAG CCTCGGGCTG
GTGATCAGTA AGGGGATGCT TTCCATCAAT GAGGGCGATG CAGAGGCAGA CATGCGCCAG
ATTGATCTAT GGACTTCGCG CGCGGCCGCA GCGATTTTCG CTCTCCTGCC GCTGGAGGTG
GACGTAGACG ACGCTGAGGA AGAGTTTCGG GAAGTAATCG GCCTGCCCGA AGGGGCTAAG
GTGCGGATTG AGGTCAACCG CTATGAGCGC GACCGGCGCA ATCGGGCTGC TGCGCTTGCC
ATTCATGGCT ATTCCTGTAA GGCCTGTGAT CTGGACATGG GGGGGAGGTA TGGGCCGGTC
GCTGCTGGTC TGATTGAGGT TCATCACACT ACGCCAGTGT CAGAGCTCGG CCTCGGATAC
ATCATCGATC CGAAAACTGA TCTGATTCCG CTTTGCCCAA ACTGTCACTC GGTTTCGCAC
CGCAGATCAC CGCCGTTCTC AGTGGCCGAG CTCCGGTCCA TGTTGCAACA TAGCTGCGAT
AGTTAG
 
Protein sequence
MLAERVSAET GLAFTGSEGR DADGSRWFEL LPAEHPAGQT FTLRTVVGWR RIDVHFRPGN 
FAGDLMAAMG AVDEAGRRTF CTVLGACREA GAEVFLKVNG TASDLGDETI WAVPWRSLGL
VISKGMLSIN EGDAEADMRQ IDLWTSRAAA AIFALLPLEV DVDDAEEEFR EVIGLPEGAK
VRIEVNRYER DRRNRAAALA IHGYSCKACD LDMGGRYGPV AAGLIEVHHT TPVSELGLGY
IIDPKTDLIP LCPNCHSVSH RRSPPFSVAE LRSMLQHSCD S