Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4750 |
Symbol | |
ID | 5872564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5308900 |
End bp | 5309745 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641549888 |
Product | HNH endonuclease |
Protein accession | YP_001670972 |
Protein GI | 167035741 |
COG category | [V] Defense mechanisms |
COG ID | [COG3183] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.742551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGGCAG AGCGCGTTTC GGCAGAAACA GGCCTTGCAT TCACCGGCTC GGAGGGGCGG GACGCTGACG GCAGTCGCTG GTTTGAATTG TTGCCGGCAG AGCACCCTGC TGGTCAGACG TTCACGCTTC GTACTGTCGT GGGGTGGCGT CGGATTGACG TGCATTTTCG ACCGGGTAAC TTTGCCGGTG ACCTCATGGC AGCGATGGGG GCGGTCGACG AAGCAGGCCG TCGCACCTTC TGCACCGTGC TGGGCGCCTG TCGAGAGGCG GGTGCGGAAG TCTTTCTTAA GGTCAACGGC ACCGCCAGCG ATCTCGGAGA TGAAACGATT TGGGCTGTCC CATGGAGAAG CCTCGGGCTG GTGATCAGTA AGGGGATGCT TTCCATCAAT GAGGGCGATG CAGAGGCAGA CATGCGCCAG ATTGATCTAT GGACTTCGCG CGCGGCCGCA GCGATTTTCG CTCTCCTGCC GCTGGAGGTG GACGTAGACG ACGCTGAGGA AGAGTTTCGG GAAGTAATCG GCCTGCCCGA AGGGGCTAAG GTGCGGATTG AGGTCAACCG CTATGAGCGC GACCGGCGCA ATCGGGCTGC TGCGCTTGCC ATTCATGGCT ATTCCTGTAA GGCCTGTGAT CTGGACATGG GGGGGAGGTA TGGGCCGGTC GCTGCTGGTC TGATTGAGGT TCATCACACT ACGCCAGTGT CAGAGCTCGG CCTCGGATAC ATCATCGATC CGAAAACTGA TCTGATTCCG CTTTGCCCAA ACTGTCACTC GGTTTCGCAC CGCAGATCAC CGCCGTTCTC AGTGGCCGAG CTCCGGTCCA TGTTGCAACA TAGCTGCGAT AGTTAG
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Protein sequence | MLAERVSAET GLAFTGSEGR DADGSRWFEL LPAEHPAGQT FTLRTVVGWR RIDVHFRPGN FAGDLMAAMG AVDEAGRRTF CTVLGACREA GAEVFLKVNG TASDLGDETI WAVPWRSLGL VISKGMLSIN EGDAEADMRQ IDLWTSRAAA AIFALLPLEV DVDDAEEEFR EVIGLPEGAK VRIEVNRYER DRRNRAAALA IHGYSCKACD LDMGGRYGPV AAGLIEVHHT TPVSELGLGY IIDPKTDLIP LCPNCHSVSH RRSPPFSVAE LRSMLQHSCD S
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