| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4748 |
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| Symbol | |
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| ID | 5872562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5306912 |
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| End bp | 5308255 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641549886 |
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| Product | DNA cytosine methylase |
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| Protein accession | YP_001670970 |
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| Protein GI | 167035739 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0270] Site-specific DNA methylase |
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| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAG TAAGTGAAGA TCTCGAACTG ATCCGTAAGC TGCTCGAGAG CTACGATCAG
AAAGCTATTG CTGAATATCT TAACCAGGTC AGTCTCGGAA GCTGGTGCCG AGAAACTATC
AACCGTTGGC TCAACGGAAA GGCCTCTCCG AGTCTAAGTC ACCGCGAGTA TGAGGCTCTC
AAGGATCTGC TCCCGAGCCC CCCGGCCAAT CACCCTAATT ACGATTTCGA CTTCATTGAT
CTCTTTGCCG GCATCGGTGG TATCCGCCGT GGCTTCGAGC AGCATGGCGG TCGCTGTGTG
TTCACCAGTG AATGGAATGA CCAAGCTGTC CGCACCTACA AGGCCAACCA TTACTCAGAT
CCTGAACACC ACCGCTATAA CGACGACATC CGCAAAGTCA CCCTCAGCGA CAACGATGAC
GTCTCCGAGC AGGACGTGAT TGCCAGTATC CATAGACAGA TTCCGGACCA TGATGTCCTG
CTGGCCGGCT TCCCCTGCCA GCCGTTCTCA ATTGCTGGCG TCTCCAAGAA AAACTCATTG
GGCCGCGTTC ACGGTTTTGA GTGCAAGACA CAAGGCACGC TGTTCTTCGA CGTAGCCAAA
ATTCTTGAAG TGAAGCGCCC AGCTGCTTTT GTCCTTGAGA ACGTCAAAAA CCTCAAGAGC
CACGACAAAG GCCGTACCTT CCGCGTCATC ATGGAAGCGC TGGACGAGCT CGGCTATTGG
GTAGCTGATG CTGACTGCGA AGGTCGCGAA GACCCGAAGG TCATTGACGG TCAGTACTTC
ACACCGCAGC ACCGCGAGCG GATCGTGCTG GTCGGCTTTC GTAAGGACTT GGGTGTTCAC
AGCGGCTTCA CCCTGAAAGA TATTGCTGAG CTGTTTCCGA AAAAACGCCC GGCCTTGGGA
GATATCTTGG ATGAGAAGGT GGATGACAAA TACATCCTCA CGCCTAAGCT CTGGCAGTAC
CTGTTCAACT ACGCAATCAA GCACAAAGCC AAGGGCAATG GCTTTGGCTT CGGACTGGTT
GGCAAGAGCT CCGTAACTCG CACGCTCTCT GCCCGTTATT ACAAAGACGG TTCTGAGATT
CTTGTAGACC GGGGCTTCAA TCAGGGCCTC GACCTGTTAC ATGAAGAGAA CTTGGCCAAG
CGTCCACGCC GGCTGACGCC GCGCGAGTGT GCTCGACTCA TGGGTTACGA CAAGCCTGGG
CAGGAGACTT TCCGCATACC GGTTTCTGAT ACCCAAGCCT ACAAGCAGTT CGGCAACTCC
GTAGTGGTCC CGGTATTCGC TGCTGTGGCT GAACTGATGA AACCTCGCAT CGCAGAAGCA
CGTAAAAAAC TCGCCTACAA GTGA
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| Protein sequence | MNQVSEDLEL IRKLLESYDQ KAIAEYLNQV SLGSWCRETI NRWLNGKASP SLSHREYEAL
KDLLPSPPAN HPNYDFDFID LFAGIGGIRR GFEQHGGRCV FTSEWNDQAV RTYKANHYSD
PEHHRYNDDI RKVTLSDNDD VSEQDVIASI HRQIPDHDVL LAGFPCQPFS IAGVSKKNSL
GRVHGFECKT QGTLFFDVAK ILEVKRPAAF VLENVKNLKS HDKGRTFRVI MEALDELGYW
VADADCEGRE DPKVIDGQYF TPQHRERIVL VGFRKDLGVH SGFTLKDIAE LFPKKRPALG
DILDEKVDDK YILTPKLWQY LFNYAIKHKA KGNGFGFGLV GKSSVTRTLS ARYYKDGSEI
LVDRGFNQGL DLLHEENLAK RPRRLTPREC ARLMGYDKPG QETFRIPVSD TQAYKQFGNS
VVVPVFAAVA ELMKPRIAEA RKKLAYK
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