| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4747 |
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| Symbol | |
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| ID | 5872561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5306428 |
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| End bp | 5306904 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641549885 |
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| Product | DNA mismatch endonuclease Vsr |
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| Protein accession | YP_001670969 |
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| Protein GI | 167035738 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
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| TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.727283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.973977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGATG TCCATACCCC GGAAGCCCGC TCTCGCAACA TGCGGGCTAT CCGAAACAAG
GATACAAAGC CGGAGCTGCT GATACGGAAA GCTCTGCATG CCCGTGGTTT CCGCTACCGT
CTCGGAGGTG CCGGTCTTCC TGGGCATCCT GATATCGTCT TGCCTAAATA CAGAACAGCC
ATCTTCATTC ATGGCTGTTT CTGGCATGGC CACAATTGCA AGTATTTCAA GCTTCCGGCG
ACACGCACCG AGTTCTGGGC TGGTAAAATC CGAAGCAACC AGGAGAGAGA TCAGCGCTCC
ACTTCACTGT TAGTGGAGCA GGGCTGGAGT GTCTTAACTG TCTGGGAGTG TTCGCTCAAG
CCATCAGGGC CAGGGGTTGA AGCGGTCCTG CATGAAATAG AGGGTGTGCT CGCGCAAAGC
TTGAATGTTA GGGTGTCTCA ACTCTTGGTT ATTTCTGGGC TGACTTCAAA GATGTAA
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| Protein sequence | MVDVHTPEAR SRNMRAIRNK DTKPELLIRK ALHARGFRYR LGGAGLPGHP DIVLPKYRTA
IFIHGCFWHG HNCKYFKLPA TRTEFWAGKI RSNQERDQRS TSLLVEQGWS VLTVWECSLK
PSGPGVEAVL HEIEGVLAQS LNVRVSQLLV ISGLTSKM
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