| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4742 |
|---|
| Symbol | |
|---|
| ID | 5872556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 5300976 |
|---|
| End bp | 5301944 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641549880 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001670964 |
|---|
| Protein GI | 167035733 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03299] phage/plasmid-related protein TIGR03299 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCATC TCGTTGATAC CATGGCCTAC GCTGGCGCCA CTCCCTGGCA TGGCTTGGGC
AACAACCTGC CCCGTAAACA ACCTATTGAG GTCTGGCAGA GCGAAGCCGG CATGGACTGG
CAGATTCTCG AAAGCCCGGT GCATTTCAAG TCGGACGCAG TCGGCCACTT GGGCACCATC
CATTCTTTCC CCGAACAAAA AGTACTCTAC CGCTCAGATA CCAAGGGGCC GTTGTCGGTG
GTCTCAAAGC GCTATCACAC CGTACAACCC CGTGAGGTAT TGGAGTTTTA CCGCGACCTC
ACCGAGGTGT CCGGCTATGA GTTGGAAACC GCAGGCGTGC TTAAAGGCGG GCGTAAGTTC
TGGGCGCTTG CACGTACCGG GCAAGGTACA GTGCTCAAGG GTAACGATCA GGTCAACGGT
TACCTCCTGC TCGCCACCTC TTGCGACGGC ACCTTGGCCA CCACCGCCAC ACCGACCACG
GTGCGGGTGG TGTGCAACAA CACCCTGACC ATCGCCTTGG ATGGCAGCAG CCGCGCCATC
AAGGTGCCAC ACAACACTCG CTTTGACCCG GCGACGGTGA AAAAGCAGCT AGGCATCGCC
GTCTCTGGCT GGGACGAGTT TATGTACCGC ATGAGGGCTT TGGCTGAACG CAAGGTGCAG
TGGCATGAGG CACTGGGTTT CTTCATGAAT GTGCTTTGTG AAACCAATCC GACCGGTGCT
CTGCCGGAGG TACTGCCCAA TGAGCGAGCC CTGCGTAAGG TGCAGGAGTT GTACGAAGGA
CGTGGTCGCG GCAGCCAGCT GGAGTCGGCA CGCGACACCG CCTGGGGTCT GCTCAATGCT
GTAACTGAGT ACGTAGACCA CGAACGCCGT GCCCGCAGTA ACGAGTACCG CTTGGACTCG
GCATGGTTCG GTCAGGGGGC GCAGATCAAG CAACGCGCCC TGGATGCCGC TCTGCAACTC
GCCGCCTAA
|
|---|
| Protein sequence | MAHLVDTMAY AGATPWHGLG NNLPRKQPIE VWQSEAGMDW QILESPVHFK SDAVGHLGTI
HSFPEQKVLY RSDTKGPLSV VSKRYHTVQP REVLEFYRDL TEVSGYELET AGVLKGGRKF
WALARTGQGT VLKGNDQVNG YLLLATSCDG TLATTATPTT VRVVCNNTLT IALDGSSRAI
KVPHNTRFDP ATVKKQLGIA VSGWDEFMYR MRALAERKVQ WHEALGFFMN VLCETNPTGA
LPEVLPNERA LRKVQELYEG RGRGSQLESA RDTAWGLLNA VTEYVDHERR ARSNEYRLDS
AWFGQGAQIK QRALDAALQL AA
|
|---|
| |