| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4738 |
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| Symbol | |
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| ID | 5872551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5294873 |
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| End bp | 5297683 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641549876 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001670960 |
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| Protein GI | 167035729 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC CCGCCGCGTT CCTGCGTGAT GCCGAGCGCC TGATACCCGC CGAACGCCGC
TTCGACGACC CCACTTCCAC CCTGGCCTTC GGCACCGACG CCAGCTTCTA CCGGTTGATC
CCCAAGCTGG TGGTACGCGT CGAGTCCGAG GACGAAGTGG TCGGCCTGAT CAAACTGGCC
CAGCGCGAGC GGGTGCCGGT CACCTTCCGC GCCGCCGGCA CCAGCCTGTC CGGCCAGGCC
ATCACTGACT CGGTGCTGAT CGTACTCGGC GACAGCTGGG GGGGTAAGGA AATCCGCGGC
CAAGGCGAGC AGATCCGCCT GCAACCTGGC GTGATCGGCG CCCAGGCCAA CGCCTGGCTG
GCCCCCTTCG GCCGCAAGAT CGGCCCGGAC CCGGCCTCGA TCAACGCCTG CAAGATCGGC
GGCATCGTCG CCAACAACGC CAGTGGCATG TGCTGCGGCA CCGCGCAGAA CACCTACCAC
ACCCTGGCCG GCCTGCGCCT GGTGCTGGCC GACGGCACCC GCCTGGACAG CGAAGACCCG
GCCAGCGTGG CCGCCTTCGA AACCAGCCAC GCCGAGCTGC TGGAGGCGCT GGCCCGCCTG
GGCCGCGAAA CCCGCGCCAA CACAGCGCTG GCCGAACGCA TCCGACACAA ATACCGGCTG
AAGAACACCA CCGGCCTGTC ACTGAACGCA CTGGTGGACT ACGACCAGCC GCTGGATATC
CTGCAACACC TGCTGGTTGG CTCCGAAGGC ACCCTGGGCT TCATCAGCGC CGTCACCTAC
GACACTGTGC CCGACCACCC GCACAAGGCC AGCGCCCTGC TGGTGTTCCC CAGCGTCGAA
AGCTGCTGCC GCGCGGTGAC CGTGCTCAAG CACCAGCCAG TCTCGGCCGT GGAACTGCTC
GACCGCCGCA GCCTGCGCTC GGTGCAGAAC ATGCCTGGCA TGCCGCTGTG GGTAAAAGGC
CTGTCGGACA ACGCCTGCGC CTTGCTGATC GAGTCCCGCG CCGCCAGCCA AAGCCTGCTG
CACGAGCAAC TGCAACAGGT GATGGCCTCG ATCGCCGACT ACCCACTGGA ACAACAGGTG
GACTTCAGCG AAGACCCGGC CGTGTACAAC CAGCTGTGGA AAATCCGCAA GGACACCTTC
CCCGCTGTCG GCGCTGTGCG TCAGACCGGC ACCACAGTCA TCATCGAAGA CGTCACCTTC
CCCGTCGAAC AGCTGGCCGA AGGCGTCAAC CGCCTGATCC AGCTGTTCGA CAAGCACCGC
TATGACGAAG CGATCATTTT CGGCCATGCA CTGGAAGGCA ACCTGCACTT CGTCTTCACC
CAGGGCTTCA ACAGCGCCGA AGAAGTCGCC CGTTACCAGG CGTTCATGGA CGACGTGGCG
CAACTGGTGG CGGTGGAGTT CGGTGGCTCG CTCAAGGCCG AACACGGCAC CGGGCGCAAC
ATGGCGCCGT TCGTGGAGCT GGAATGGGGC CATGACGCCT ACCAGCTGAT GTGGCAGCTC
AAGCGCCTGC TCGACCCCAA CGGCATTCTC AACCCCGACG TGGTGCTGAG CGAAGACCCG
GACATCCACC TGAAAAACCT CAAGCCACTG CCTGCCGCCG ACGAAATCGT CGACAAGTGC
ATCGAATGCG GCTTCTGCGA ACCGGTGTGC CCGTCCAAGG GCCTGACCCT CAGCCCACGC
CAGCGCATCG TCATGTGGCG TGACATCAAG GCCAAGCAAC GCGCCGGCAT CGACACCCGC
GAACTGATGC AGACCTACCA GTACCAGGGC ATCGACACCT GCGCCGCCAC TGGCCTATGT
GCCCAGCGCT GCCCGGTCGG CATCAACACC GGCGAACTGG TGAAGAAACT GCGTAGCCAG
GCCGCCGACC ACAAAAAAAC CGCCGATTGG CTGGCCGAAC ATTTCCACAC CGCCCTGAGC
GGTGCGCGCC TGACACTCAC TGCCGCCAAC ACCGCCCGCA AGCTGCTGGG TGCCCCGCGC
CTGGGCCGCT TGAGCGCCTC GCTGAGCAAA GCCAGCAAAG GCCGCCTGCC ACAGTGGACC
CCGGCCATGC CGCAACCCCT GCGCCCGATC AGCTTCGGCC CGGCCAGCAA CGATGCCCGC
CCCCGCGTGG TGTACCTGGC GGCCTGCGTT TCACGGGTGA TGGGCCCGGC CTACGCCGAC
CGCGAACAAA GCTCGCTGCT GGACAAAACC CGCGCCCTGC TGGAAAAGGC CGGCTACCAA
GTGGTGTTCC CCGACAACGC CGACGGCTTG TGCTGCGGCC AGCCGTTCGC CTCCAAGGGC
TACCCCGAGC AGGCCGAACA CAAGCGCCAG GAACTGATCA ACGCCCTGTT GCACGCCAGC
CGTGGCGGCC TCGATCCGAT CTACTGCGAC ACCAGCCCCT GCACCCTGCG CCTGGTGCAA
GACCTGGGCG ACACCCGGCT GGACCTGTAC GACCCGGTGC GCTTCATTCG CACCCACCTG
CTCGACCGCC TGGAATTCAC CCCCCAGGAC GAACCCGTAG CCGTGCACGT GACCTGCAGC
ACCCAGCATC TGGGTGAAAG CCAGGCGCTG ATCGACCTGG CGCGGCGTTG CAGCAAACAG
GTGGTCATCC CCGAAGGCAT TCATTGCTGC GGCTTTGCCG GCGACAAAGG CTTCACCACC
CCCGAGCTGA ACGCCCATTC GCTGCGCAGC CTGAAAGATG CCGTGCAGTA TTGCAGCGAA
GGCATCTCCA CCAGCCGCAC CTGCGAGATT GGCCTGTCGA GCCACAGCGG CATCGACTAC
CACGGCCTGG TCTACCTGGT AGACCGCGTC ACCCGCCCCC GCAGCATCTG A
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| Protein sequence | MSLPAAFLRD AERLIPAERR FDDPTSTLAF GTDASFYRLI PKLVVRVESE DEVVGLIKLA
QRERVPVTFR AAGTSLSGQA ITDSVLIVLG DSWGGKEIRG QGEQIRLQPG VIGAQANAWL
APFGRKIGPD PASINACKIG GIVANNASGM CCGTAQNTYH TLAGLRLVLA DGTRLDSEDP
ASVAAFETSH AELLEALARL GRETRANTAL AERIRHKYRL KNTTGLSLNA LVDYDQPLDI
LQHLLVGSEG TLGFISAVTY DTVPDHPHKA SALLVFPSVE SCCRAVTVLK HQPVSAVELL
DRRSLRSVQN MPGMPLWVKG LSDNACALLI ESRAASQSLL HEQLQQVMAS IADYPLEQQV
DFSEDPAVYN QLWKIRKDTF PAVGAVRQTG TTVIIEDVTF PVEQLAEGVN RLIQLFDKHR
YDEAIIFGHA LEGNLHFVFT QGFNSAEEVA RYQAFMDDVA QLVAVEFGGS LKAEHGTGRN
MAPFVELEWG HDAYQLMWQL KRLLDPNGIL NPDVVLSEDP DIHLKNLKPL PAADEIVDKC
IECGFCEPVC PSKGLTLSPR QRIVMWRDIK AKQRAGIDTR ELMQTYQYQG IDTCAATGLC
AQRCPVGINT GELVKKLRSQ AADHKKTADW LAEHFHTALS GARLTLTAAN TARKLLGAPR
LGRLSASLSK ASKGRLPQWT PAMPQPLRPI SFGPASNDAR PRVVYLAACV SRVMGPAYAD
REQSSLLDKT RALLEKAGYQ VVFPDNADGL CCGQPFASKG YPEQAEHKRQ ELINALLHAS
RGGLDPIYCD TSPCTLRLVQ DLGDTRLDLY DPVRFIRTHL LDRLEFTPQD EPVAVHVTCS
TQHLGESQAL IDLARRCSKQ VVIPEGIHCC GFAGDKGFTT PELNAHSLRS LKDAVQYCSE
GISTSRTCEI GLSSHSGIDY HGLVYLVDRV TRPRSI
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