| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4737 |
|---|
| Symbol | lldD |
|---|
| ID | 5872550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 5293652 |
|---|
| End bp | 5294797 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641549875 |
|---|
| Product | L-lactate dehydrogenase |
|---|
| Protein accession | YP_001670959 |
|---|
| Protein GI | 167035728 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATTT CTGCCTCTAC CGACTATCGC GCCGCGGCCC AACGCAAGCT GCCTCCCTTC
CTGTTCCACT ACGCCGATGG CGGCGCCTAC GCCGAGCACA CCCTGCGCCA CAACGTCTCG
GACCTGGCCA GCATTGCCCT GCGCCAGCGC GTGCTGAACA ACATGTCCGA GCTCAGCCTT
TCCACCCGCC TGTTCGACGA AACCCTGAGC ATGCCGGTGG CCCTGGCCCC GGTCGGCCTC
ACCGGCATGT ACGCCCGCCG TGGCGAAGTG CAGGCGGCGC GTGCGGCGGC CGCCCATGGC
ATCCCGTTCA CCATGTCCAC GGTGTCGGTG TGCCCGATCG AAGAAGTGGC GCCCGCCATC
GACCGGCCGA TGTGGTTCCA GCTGTATGTG CTCAAGGACC GCGGCTTCAT GCGTAACGCC
CTGGAGCGGG CCAAGGCTGC CGGGGTCAAG ACCCTGGTAT TCACCGTCGA CATGCCAGTG
CCCGGCGCCC GCTACCGCGA CGCCCACTCC GGCATGAGCG GCAAGAACGG CCCGCTGCGC
CGCGTGCTGC AAGCCATGAC CCACCCAGAG TGGGCATGGG ATGTCGGCGT GATGGGCCGC
CCGCATGACC TGGGCAACAT TTCCAAATAC CGTGGCAACC CAACCGGCCT TGCCGACTAC
ATCGGCTGGC TGGGTAACAA CTTCGACCCA TCCATTTCCT GGAAAGACCT GGAATGGATT
CGTGAGTACT GGGACGGCCC GATGATCATC AAGGGCATCC TCGATGCCGA CGACGCCCGC
GATGCGGTCA AATTCGGTGC CGACGGCATC GTGGTGTCCA ACCACGGCGG CCGCCAGCTC
GACGGCGTGC TGTCCAGCGC CCGCGCCCTG CCGGCGATTG CCGACGCGGT CAAGGGCGAC
CTCAAGATTC TGGCCGACTC CGGCATTCGC AGCGGCCTGG ACGTGGTGCG CATGATCGCC
TTGGGCGCCG ACACCGTCTT GATCGGCCGC GCCTTCCTCT ACGCCCTTGC CGTGCATGGC
CAGGCCGGGG TGAAGAACCT GCTGGAGCTG TTCGAGAAAG AAATGCGCGT GGCCATGGTG
CTGACCGGTG CCAAGTCGAT CAGCGAGATC ACCCGCGACT CGCTGGTACG CGAACTGGGC
GCCTGA
|
|---|
| Protein sequence | MIISASTDYR AAAQRKLPPF LFHYADGGAY AEHTLRHNVS DLASIALRQR VLNNMSELSL
STRLFDETLS MPVALAPVGL TGMYARRGEV QAARAAAAHG IPFTMSTVSV CPIEEVAPAI
DRPMWFQLYV LKDRGFMRNA LERAKAAGVK TLVFTVDMPV PGARYRDAHS GMSGKNGPLR
RVLQAMTHPE WAWDVGVMGR PHDLGNISKY RGNPTGLADY IGWLGNNFDP SISWKDLEWI
REYWDGPMII KGILDADDAR DAVKFGADGI VVSNHGGRQL DGVLSSARAL PAIADAVKGD
LKILADSGIR SGLDVVRMIA LGADTVLIGR AFLYALAVHG QAGVKNLLEL FEKEMRVAMV
LTGAKSISEI TRDSLVRELG A
|
|---|
| |