Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4736 |
Symbol | |
ID | 5872549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5291918 |
End bp | 5293588 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641549874 |
Product | L-lactate transport |
Protein accession | YP_001670958 |
Protein GI | 167035727 |
COG category | [C] Energy production and conversion |
COG ID | [COG1620] L-lactate permease |
TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCT GGCAACAACT CTATAGCCCG CTTGGTAGTC TTGGCCTGTC CGCACTGGCG GCGGTCATCC CCATCGTGTT CTTCTTCCTG GCCCTCGCCG TGTTCCGCCT CAAGGGCCAC GTAGCGGGCA GCATCACCCT CGCGTTGTCG ATCCTGGTGG CGATCTTCGC CTTCCAGATG CCTGTCGACA TGGCCTTCGC CGCCGCGGGT TACGGCTTCC TCTACGGCCT CTGGCCAATT GCCTGGATCA TCGTTGCCGC GGTGTTCCTG TACAAACTCA CGGTCAAGAG CGGCCAGTTC GAGGTGATCC GCAGCTCGGT GCTGTCGATT ACCGACGACC AGCGCCTGCA AGTACTGCTG ATCGGCTTCT GCTTCGGTGC CTTCCTGGAA GGCGCTGCAG GCTTCGGCGC ACCCGTGGCA ATCACTGCCG CGCTGCTGGT GGGCCTGGGC TTCAACCCGC TGTACGCCGC CGGCCTGTGC CTGATCGCCA ATACCGCACC GGTGGCCTTC GGCGCCCTGG GCATCCCGAT CATCGTGGCC GGCCAGGTCA CCGGCATCGA CGCCTTCCAC ATCGGCGCCA TGACCGGCCG CCAGCTGCCA CTGCTGTCGC TGTTCGTGCC GTTCTGGCTG GTGTTCATGA TGGACGGCCT GCGCGGCGTG AAGGAAACCT GGCCTGCCGC GCTGGTCGCC GGCCTGAGCT TCGCCGTCAC CCAGTACTTC ACTTCGAACT TCATCGGCCC AGAGCTGCCA GACATCACCT CGGCACTGGC CAGCCTGATC TGCCTCACCC TGTTCCTGAA GGTCTGGCAG CCCAAGCGTT CGTTCAGCGA AGCCAAGGGC AGCGTCGGCG CCGCCGTGGT GCAGCCAAGC GGCAGCCAGC CTAGCCCGTA CAGCTTTGGC GAGATCTTCA AGGCCTGGTC GCCGTTCCTG ATACTGACCG TACTGGTCAC CATCTGGACC CTGAAGCCGT TCAAGGCAGC GTTCGCCCCA GGCGGCGCGA TGTACAACTT CGTGTTCAAC TTCGCCATCC CACACCTCGA CCAGCTGGTG ATCAAGACCG CACCGATCGT TGCTGCGCCG ACCGCCATGC CTGCGGTGTT CAAGCTCGAC CCGATCTCCG CCACCGGCAC CGCGATCTTC CTCTCGGCAC TGATCTCCAT GGCGGTGCTG AAGATCAACT TCAAAACTGG TCTTACCACT TTCAAAGAAA CCTTCTGGGA ACTGCGCTGG CCGATTCTGT CGATCGGCAT GGTGCTGGCC TTCGCCTTCG TCACCAACTA CTCCGGCATG TCCTCGACCA TGGCCCTGGT GCTGGCCGGC ACCGGCGCTG CATTCCCGTT CTTCTCGCCG TTCCTCGGCT GGCTGGGCGT GTTCCTGACT GGCTCGGACA CCTCGTCCAA CGCCCTGTTC AGCTCGCTGC AGGCCACCAC CGCGCACCAG ATCGGGGTCA ACGACACCCT GCTGGTAGCG GCCAACACCA GCGGCGGCGT GACCGGCAAG ATGATCTCGC CGCAATCGAT CGCCGTGGCC TGCGCCGCCA CCGGCCTGGT GGGCAAGGAA TCGGACCTGT TCCGCTTCAC CGTCAAGCAC AGCCTGTTCT TCGCCACCAT CGTCGGCCTG ATCACCCTGA TCCAGGCTTA CTGGCTGACC GGCATGCTGG TTCATCACTA A
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Protein sequence | MQTWQQLYSP LGSLGLSALA AVIPIVFFFL ALAVFRLKGH VAGSITLALS ILVAIFAFQM PVDMAFAAAG YGFLYGLWPI AWIIVAAVFL YKLTVKSGQF EVIRSSVLSI TDDQRLQVLL IGFCFGAFLE GAAGFGAPVA ITAALLVGLG FNPLYAAGLC LIANTAPVAF GALGIPIIVA GQVTGIDAFH IGAMTGRQLP LLSLFVPFWL VFMMDGLRGV KETWPAALVA GLSFAVTQYF TSNFIGPELP DITSALASLI CLTLFLKVWQ PKRSFSEAKG SVGAAVVQPS GSQPSPYSFG EIFKAWSPFL ILTVLVTIWT LKPFKAAFAP GGAMYNFVFN FAIPHLDQLV IKTAPIVAAP TAMPAVFKLD PISATGTAIF LSALISMAVL KINFKTGLTT FKETFWELRW PILSIGMVLA FAFVTNYSGM SSTMALVLAG TGAAFPFFSP FLGWLGVFLT GSDTSSNALF SSLQATTAHQ IGVNDTLLVA ANTSGGVTGK MISPQSIAVA CAATGLVGKE SDLFRFTVKH SLFFATIVGL ITLIQAYWLT GMLVHH
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