Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4735 |
Symbol | |
ID | 5872548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5290896 |
End bp | 5291663 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549873 |
Product | GntR domain-containing protein |
Protein accession | YP_001670957 |
Protein GI | 167035726 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTTTG ATCAGGTCCG CCAACGGCGC CTGTCCGACG ACATTGTCGA TCGGTTGGAA GGGATGATTC TGGAAGGCAC GCTGACCTCG GGGCAGCGGC TGCCGGCCGA GCGCGTCCTT GCCGAGCAAT TTGGTGTGTC CCGCCCGTCA CTGCGTGAGG CGATCCAGAA GCTGGTGGCC AAAGGGCTGC TGGTCAGCCG TCAGGGCGGG GGCAATTTTG TTGCCGAGTC GCTGGGGTCC ACCTTCAGCG ACCCATTGCT GCAGTTGCTC GAGCACAGTG CTGAGGCGCA GCGTGACCTG CTCGAATTCC GCCATACCCT GGAGGCGTCC TGTGCCTACT ATGCTGCCCA GCGTGCCACC GAGCCTGACC GAGCGCGGTT GAAGGCGGCC TTCGATGTGT TGCAGGACTG CTATGCCAGG GTCGACGAAG TGACTCGGGC GGAGGAGGGC GCGGCGGATG CACGCTTCCA CCTGGCGATT GCCGAGGCCA GCCATAACGC AGTGTTGCTG CATACCATTC GGGGGTTGTT CGACCTGCTC AAGCGCAACG TGGTGACTAA CATTGGCGGC ATGTACCAGC AGCGCACCGA AACCCGGGAC ATGCTGATCA GTCAGCACCG GGAGCTGTAC CTGGCGATTG TCGAGGGCAG GGCGGAGGAT GCGCGCGAGG TGTCCAGCCG GCACATTCTG TATGTGCAGG AGGTGCTGCA AGAGGCGCAC GAAGAGGCGC AGCGGGTGGC GCGGGCAGAG CGGCGTAGCG GGCGTTGA
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Protein sequence | MVFDQVRQRR LSDDIVDRLE GMILEGTLTS GQRLPAERVL AEQFGVSRPS LREAIQKLVA KGLLVSRQGG GNFVAESLGS TFSDPLLQLL EHSAEAQRDL LEFRHTLEAS CAYYAAQRAT EPDRARLKAA FDVLQDCYAR VDEVTRAEEG AADARFHLAI AEASHNAVLL HTIRGLFDLL KRNVVTNIGG MYQQRTETRD MLISQHRELY LAIVEGRAED AREVSSRHIL YVQEVLQEAH EEAQRVARAE RRSGR
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