Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4733 |
Symbol | |
ID | 5872546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5289683 |
End bp | 5290117 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641549871 |
Product | cyclase/dehydrase |
Protein accession | YP_001670955 |
Protein GI | 167035724 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.476738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACCC ATATTCAACG CTCCGCCCTG CTGCCATACC CCGCCCAGGC GCTCTACGAT CTGGTCAACG ATGTGGCCAG CTACCCTGAG TTTCTGCCGT GGTGCTCGGC CTCGACGGTG ATCGAAGCCA GTGACACGCA CATGCGGGCC AAGCTCGAAG TGGCCAAGGG CGGCATGAGC CAGCACTTCG TCACGCGCAA TGTGCTGGTG CCGGGGCAGT CCATCGAGAT GAACCTCGAA GAGGGGCCAT TCACTCAGCT GCATGGTGTG TGGGTGTTCA AACCGCTGGG TGAAAAAGCC TGCAAGATCA GCCTGGACCT GTCCTTCGAT TATGCCGGGC CGATCGTGCG TGCCACGTTG GGGCCGCTGT TCAATCAGGC AGCCAACACC CTGGTCGATG CCTTCTGCCA GCGCGCCAAG CAATTGCATG CCTGA
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Protein sequence | MTTHIQRSAL LPYPAQALYD LVNDVASYPE FLPWCSASTV IEASDTHMRA KLEVAKGGMS QHFVTRNVLV PGQSIEMNLE EGPFTQLHGV WVFKPLGEKA CKISLDLSFD YAGPIVRATL GPLFNQAANT LVDAFCQRAK QLHA
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