Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4729 |
Symbol | |
ID | 5872542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5286048 |
End bp | 5286602 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549867 |
Product | heat shock protein GrpE |
Protein accession | YP_001670951 |
Protein GI | 167035720 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACG ATCAGCTGAA CGAGAAAGAC CTTAATGCCG AAGAAGCCGC TGCAGTGGAT AACGGCGCCC GCGTTCAGGA GCTCGAGGAG CAGCTGGCCG CCGCCAAGGA TCAGTCCCTG CGTGTCGCAG CAGAAGCGCA GAACAGCATT CGCCGCGCCG AGCAGGAAGT CGACAAGGCC CGCAAGTTCG CCCTCGAGAA ATTCTCCAGC GACCTGCTGC CGGTGATCGA CAGCCTGGAA CTGGCCTTGG CTCACTCCAG CGCCGACGAC GAGCACGTCA AGCAGATTCG TGAAGGCGTC GAGCTGACCC TGAAGATGTT CCAGGACACC CTCAAGCGCT ACAACCTCGA AGCTGTCGAC CCGCACGGTC AGCCGTTCAA CCCTGAGCAC CACCAGGCCA TGGCCATGCA GGAAAACGCC GAAGTAGAGC CAAACAGCGT GCTGAACGTG TTCCAGAAAG GCTACCTGCT GAATGGCCGC CTGCTGCGCC CCGCCATGGT GGTGGTCAGC AAGGCGCCGG CTGCCCCGCA ACCTTCTATC GACGAGAAGG CTTGA
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Protein sequence | MADDQLNEKD LNAEEAAAVD NGARVQELEE QLAAAKDQSL RVAAEAQNSI RRAEQEVDKA RKFALEKFSS DLLPVIDSLE LALAHSSADD EHVKQIREGV ELTLKMFQDT LKRYNLEAVD PHGQPFNPEH HQAMAMQENA EVEPNSVLNV FQKGYLLNGR LLRPAMVVVS KAPAAPQPSI DEKA
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