| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4723 |
|---|
| Symbol | greA |
|---|
| ID | 5872536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5276679 |
|---|
| End bp | 5277161 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641549861 |
|---|
| Product | transcription elongation factor GreA |
|---|
| Protein accession | YP_001670945 |
|---|
| Protein GI | 167035714 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0782] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTA CCAAGTACCC GATGACCGTC CAGGGCGCTC GCGCCCTGGA AGAGGAGCAC
CTGTTCCTGA GCAAGACCGA GCGCCCACGC CTGAGCCAGG CGATCGGTGA AGCACGTGAG
CTGGGTGACC TCAAGGAAAA CGCCGAATAC CATGCTGCCC GTGAAGAGCA GGGCATGGTC
GAGGCGCGTA TCCGCGATAT CGAAGGCCGT CTGCAGAATT CGGTCGTGAT CGACGTGACC
ACGATCCCTC ACACCGGCAA GGTGATTTTC GGTACCACCG TGGTACTGGC CAACACCGAA
ACCGATGAAG AGGTGACCTA TCAGATCGTC GGCGAGGATG AAGCCGACGT GAAACAGGGC
AAGCTCTCAA GCGGTGCGCC GATTGCCCGT GCCATCATCG GCAAGGAAGA AGGTGATACT
GTCGTCGTCA AGACGCCTAG CGGCACGGTC GAGTACGAGA TTGTCGAAGT CAAGCACATC
TGA
|
|---|
| Protein sequence | MSITKYPMTV QGARALEEEH LFLSKTERPR LSQAIGEARE LGDLKENAEY HAAREEQGMV
EARIRDIEGR LQNSVVIDVT TIPHTGKVIF GTTVVLANTE TDEEVTYQIV GEDEADVKQG
KLSSGAPIAR AIIGKEEGDT VVVKTPSGTV EYEIVEVKHI
|
|---|
| |