Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4713 |
Symbol | nusA |
ID | 5872524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5267239 |
End bp | 5268720 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641549849 |
Product | transcription elongation factor NusA |
Protein accession | YP_001670935 |
Protein GI | 167035704 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAG AAGTACTGCT GGTTGTTGAA TCGGTATCCA ACGAAAAAGG TGTACCGCCC GGCGTCATTT TCGAAGCGCT GGAAGTGGCC CTGGCCACTG CAACCAAAAA ACGTTTTGAA GACGAAGTCG ACCTGCGTGT GGAAATCAAT CGCCACACCG GTAGCTACGA GACTTTCCGT CGTTGGACCG TGGTCGACGA AGCCGATCTT GATGATCCGG CAATCGAGAC CTGGCTGGAC AAGATCAAGG ACACCCACCC TGAAGCCAAG GTCGGTGACG TGATCGAGGA GAAGATCGAG TCCATCGAGT TCGGTCGTAT CGCCGCCCAG ACCGCCAAGC AGGTCATCGT GCAGAAGGTC CGTGAGGCCG AGCGCGCCCA GGTGGTTGAT GCCTACCGCG AACGCGTGGG CGAGATCATC TCCGGTACCG TTAAAAAGGT TACCCGCGAC AACGTCATCG TTGACCTGGG CAACAATGCC GAGGCCTTGC TGGCTCGCGA AGACATCATT CCGCGCGAAA CCTTCCGTGT TGGCGTGCGC CTGCGTGCGC TGCTCAAGGA AATTCGCACT GAAAACCGTG GCCCACAGCT GATTCTGTCG CGCACCGCGC CGCAGATGCT GATCGAGCTT TTCCGCATTG AAGTGCCGGA AATCGCCGAG GGCCTCATCG AAGTCATGGC TGCTTCCCGT GATCCGGGTT CGCGAGCCAA GATCGCCGTC CGCTCCAAGG ACAAGCGTAT CGACCCGCAA GGTGCCTGCA TCGGCATGCG TGGTTCGCGC GTCCAGGCCG TATCCGGGGA GCTGGGTGGT GAGCGTGTGG ATATCGTCCT GTGGGACGAT AACCCGGCGC AGTTCGTCAT CAACGCCATG TCGCCGGCCG AAGTCGCGGC GATCATCGTT GATGAAGATG CCCATGCCAT GGACATCGCC GTCGCCGAGG ACAACCTGGC CCAGGCCATT GGCCGTGGCG GTCAGAACGT TCGCCTGGCC AGTCAGTTGA CCGGCTGGAC CCTGAACGTG ATGACCGAGA AGGACATCCA GGCCAAGCAA CAGGCCGAAA CCGGTGACAT CCTGCGCAAT TTCATCGATG AACTGGAAGT CGACGAGGAG CTGGCCCAAG TGCTGGTCGA CGAAGGCTTC ACCAGCCTCG AAGAAATTGC CTACGTACCG TTGGAAGAAA TGCTCAACAT CGATGGCTTT GACGAAGATA TCGTCAATGA GCTCCGCGCT CGAGCCAAGG ACCGTTTGTT GACCAAGGCC ATCGCTACCG AAGAAAAACT GGCAGACGCC CACCCGGCCG AAGACCTGCT CTCCCTCGAG GGCATGGACA AGGACCTGGC GGCTGAACTG GCGGTGCGCG GCGTGGTTAA CCGCGAAGAC CTGGCCGAGC AGTCGATCGA CGATCTGCTC GACATCGACG GCATCGACGA AGAGCGTGCC GGCAAGTTGA TCATGGCCGC CCGAGCCCAC TGGTTCGAGT AA
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Protein sequence | MSKEVLLVVE SVSNEKGVPP GVIFEALEVA LATATKKRFE DEVDLRVEIN RHTGSYETFR RWTVVDEADL DDPAIETWLD KIKDTHPEAK VGDVIEEKIE SIEFGRIAAQ TAKQVIVQKV REAERAQVVD AYRERVGEII SGTVKKVTRD NVIVDLGNNA EALLAREDII PRETFRVGVR LRALLKEIRT ENRGPQLILS RTAPQMLIEL FRIEVPEIAE GLIEVMAASR DPGSRAKIAV RSKDKRIDPQ GACIGMRGSR VQAVSGELGG ERVDIVLWDD NPAQFVINAM SPAEVAAIIV DEDAHAMDIA VAEDNLAQAI GRGGQNVRLA SQLTGWTLNV MTEKDIQAKQ QAETGDILRN FIDELEVDEE LAQVLVDEGF TSLEEIAYVP LEEMLNIDGF DEDIVNELRA RAKDRLLTKA IATEEKLADA HPAEDLLSLE GMDKDLAAEL AVRGVVNRED LAEQSIDDLL DIDGIDEERA GKLIMAARAH WFE
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