| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4698 |
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| Symbol | panB |
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| ID | 5872509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5249388 |
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| End bp | 5250188 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549834 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_001670920 |
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| Protein GI | 167035689 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.159118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00233641 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTGAAG TAACCCTTAC CACCCTCAAT GGCCTCAAGG CCAAGGGTGA AAAAATCACC
ATGCTGACTT GCTACGACGC GACCTTCGCC AAGGCCGCCA GCCAGGCCGG CGTTGAAGTG
TTGCTGGTGG GCGACTCACT GGGGATGGTC CTGCAGGGCC ACGACAGCAC CTTGCCGGTA
ACCACGGCAG ACATGGCCTA CCACACCGCC TGCGTCAAAC GCGGCAACGA CGGTGCGCTG
ATCCTCGCCG ACCTGCCTTT CATGGCGCAC GCTACCCCGG AGCAGGCTTT TGCCAACAGC
GCCACGCTGA TGCAAGCCGG CGCCCACATG ATCAAGATCG AAGGCGCAGC CTGGCTTGCC
GAAACCATCC GCCTGCTGGC CGAGCGTGGC GTGCCGGTGT GCGCACACAT GGGCCTGACC
CCGCAAACCG TCAATGTGCT GGGCGGCTAC AAAGTGCAAG GCCGCCAGGA AGCCCAGGCC
CGGCAGATGC GCGCCGACGC GATTGCCCTG GAGCAGGCCG GTGCGGCCAT GCTGCTGCTC
GAATGCGTAC CCAGCGAACT GGCGGCGGAA ATCACCAACG CCGTGGGTAT TCCCGTAATC
GGTATTGGCG CGGGCAGCGC CACCGATGGC CAGGTACTGG TGCTGCACGA CATGCTCGGC
TTGTCGCTGA GTGGCCGGGT ACCGAAGTTC GTGAAAAACT TCATGCAAGG CCAGCCAGAT
ATCCACAGCG CCCTCGTCGC TTATGTCGAG GCCGTCAAGC AAGTCAGCTT CCCAGGCAGC
GAACACGGGT TCAGTGCATG A
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| Protein sequence | MPEVTLTTLN GLKAKGEKIT MLTCYDATFA KAASQAGVEV LLVGDSLGMV LQGHDSTLPV
TTADMAYHTA CVKRGNDGAL ILADLPFMAH ATPEQAFANS ATLMQAGAHM IKIEGAAWLA
ETIRLLAERG VPVCAHMGLT PQTVNVLGGY KVQGRQEAQA RQMRADAIAL EQAGAAMLLL
ECVPSELAAE ITNAVGIPVI GIGAGSATDG QVLVLHDMLG LSLSGRVPKF VKNFMQGQPD
IHSALVAYVE AVKQVSFPGS EHGFSA
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