Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4696 |
Symbol | |
ID | 5872507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5247261 |
End bp | 5248649 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549832 |
Product | poly(A) polymerase |
Protein accession | YP_001670918 |
Protein GI | 167035687 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000724393 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGAAGA AGCTGTTCCA GTCTTTCCGC CCGCCCGTAC CGGGCCCGCA CCACAGGCGC ACCACGCCTG AGGTGATCAA CAAGAGCCAG CACTCGCTGC AGCGCCACCA GTTCAGCCGC CATGCGGTGA ACATCGTGGA GCGCCTGCAA AGCGCCGGCT ACCAGGCTTA CCTGGTCGGT GGCTGTGTCC GCGACCTGAT GCTGGGCATC ACGCCGAAGG ACTTCGACGT CGCCACCAGC GCCACCCCCG AACAGGTTCG TGCCGAGTTC CGCAACGCGC GCATCATTGG TCGCCGCTTC AAGCTGGTCC ACGTGCATTT CGGCCGTGAG ATCATTGAAG TCGCCACCTT CCGCGCCCAC CACTCGGAAG ACGACCAGGG CGACGCCCAC CGTTCGTCGC ATAACGCCAG TGGTCGCATC TTGCGAGACA ACGTGTACGG CACCCTGGAA GAGGACGCGC AACGCCGCGA CTTCACCATC AACGCCCTGT ACTACGACCC GGTCAGCGAG CGCATTCTCG ATTACGCCAA CGGTGTGCAC GATGTGCGCA ATCGCCTGCT GCGGCTGATT GGCGACCCGA CCCACCGTTA CCAGGAAGAC CCGGTGCGCA TGCTGCGTGC GGTGCGCTTT GCCGCCAAGC TCGACTTTGG CATCGAAAAG CACACCTTCC AGCCGATCCG CGGCCTGGCC CCGATGCTGC GCGAGATTCC GCCCGCGCGC CTGTTCGAAG AGTGCCTCAA GCTGTTCCTC AGCGGCCAAG GTGCTATCGC CTTCGAAATG CTGGTCGACC TGGAGTTGTT CGAGCCGCTG TTCCCTGCCA GCGCCCATGC CCTGGACGAG CGCCCAACCT ACACCCACAC GTTGATCAGC CAGGCGCTGA ACAACACCGA CCTGCGCGTG AAGCAGGGCA AACCGGTGAC GCCGGCCTTC CTGTTCGCTG CACTGCTGTG GCCAGCCCTG CCAGCCCGCG TGCTGCACCT GCAGAACCAG GGTGTGCCGC CGATCCCGGC CATGAACGGT GCGGCTCACG ACCTGATCGC CGAGCAATGC GCGCGCATCG CCATTCCCAA GCGTTTTACC CTGCCGATCC GCGAGATCTG GGACATGCAG GAGCGCCTGC CACGCCGCAG CGGCAAGCGC GCCGACATGC TGCTGGACAA CCCGCGCTTC CGCGCCGGTT ACGACTTCCT GCTGTTGCGC GAAAGCGCTG GGGAAGAAAC CGACGACCTC GGCCAGTGGT GGACCGATTA CCAGGATGCC AACGACAGCG AGCGCCGCGA AATGATCCGC GAGCTGGGCA ACCGTGACGA AGGCACCGGC GCCGGCCCAC GCAAACGCAA GCGCAGCGGC AGCAAACGCA AACGCGGTGG CGACGAGGCG TTCGAGTGA
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Protein sequence | MLKKLFQSFR PPVPGPHHRR TTPEVINKSQ HSLQRHQFSR HAVNIVERLQ SAGYQAYLVG GCVRDLMLGI TPKDFDVATS ATPEQVRAEF RNARIIGRRF KLVHVHFGRE IIEVATFRAH HSEDDQGDAH RSSHNASGRI LRDNVYGTLE EDAQRRDFTI NALYYDPVSE RILDYANGVH DVRNRLLRLI GDPTHRYQED PVRMLRAVRF AAKLDFGIEK HTFQPIRGLA PMLREIPPAR LFEECLKLFL SGQGAIAFEM LVDLELFEPL FPASAHALDE RPTYTHTLIS QALNNTDLRV KQGKPVTPAF LFAALLWPAL PARVLHLQNQ GVPPIPAMNG AAHDLIAEQC ARIAIPKRFT LPIREIWDMQ ERLPRRSGKR ADMLLDNPRF RAGYDFLLLR ESAGEETDDL GQWWTDYQDA NDSERREMIR ELGNRDEGTG AGPRKRKRSG SKRKRGGDEA FE
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