| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4694 |
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| Symbol | |
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| ID | 5872505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5242041 |
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| End bp | 5245016 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549830 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001670916 |
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| Protein GI | 167035685 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000630671 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGATGA GCTTTAGCCT GACCCAGATG ATCCTGATCA GCGCCGGGTA CCTCATGGTG
CTGTTCGGCG TGGCCTGGAT CAGCGAGCGC GGGTTGATCC CGCGCTCGAT CATTCGCCAC
CCGCTTACCT ACACCCTGTC GCTGGGCGTG TACGCCAGTG CCTGGGCCTT TTATGGCTCG
GTGGGCCTGG CCTACCAGTA TGGCTACGGC TTCCTCGCCT GTTACCTGGG GGTGTCCGGC
GCCTTCCTGC TGGCACCGGT GCTGCTCTAC CCGATCCTCA AGATCACCCG CACCTACCAG
CTGTCATCGC TGGCCGACCT GCTGGCGTTC CGCTTCCGCA GCACCTGGGC CGGGGCATTG
ACCACCATCA TCATGCTCAT CGGTGTGCTG CCGTTGCTGG CTCTGCAGAT CCAGGCGGTG
GCCGATTCGA TCAGCATCCT TACCGGTGAG CCGGTCAAGG CCCGGGTAGC GTTTGCCTTC
TGTACGCTGA TCATCCTGTT CACCATTTTC TTCGGCTCGC GGCACATTGC CACGCGTGAG
AAACATGAAG GGCTGGTTTT CGCCATCGCC TTCGAGTCGG TGATCAAGCT GCTGGCCCTG
GGCGGTATCG GCCTGTACGC CTTGTATGGC GTATTCGGCG GCCCGCATGA GCTGGAAGTC
TGGCTGCTAC AGAACCAGAC CGCCCTTGCC GCCCTGCACA CCCCGCTGCA GGAAGGCCCA
TGGCGCACCC TGCTGCTGGT GTTCTTCGCC TCGGCCATCG TCATGCCGCA CATGTACCAC
ATGGCCTTCA CCGAAAACCT CAACCCGCGC TCGCTGGTCA GCGCCAGCTG GGGCCTGCCG
CTGTTCCTGC TGCTGATGAG CCTGGCCGTA CCGCTGGTGC TGTGGGCCGG CCTGCGCCTG
GGCGCTAGCA CCAACCCCGA GTACTTCACC CTGGGCCTGG GGATTGCCGC CAACAACCAG
GCATTGGCAC TGCTGGCCTA CATTGGCGGC CTGTCGGCGG CCAGCGGCCT GATCATCGTC
ACCACCCTGG CGCTGTCGGG CATGGCCCTG AACCACCTGG TGCTGCCGCT GTACCAACCC
CCGGCCGAGG GCAACATCTA CCGCTGGCTG AAGTGGACCC GACGGGCACT GATCGTCGCC
ATCATCACCG CCGGCTTCAT GTTCTACCTG ACCCAGAACA ACCACCAGAG CCTGGCCAAC
CTGGGCATCG TCGCCTTCGT CGCCACCTTG CAGTTTTTGC CTGGCGTGCT GTCGGTACTG
TACTGGCCGA CCGCCAACCG CCGCGGCTTC ATCGCCGGGC TGCTGGCCGG CACCTTGGTG
TGGATGGTGA CCATGCTGCT GCCGCTGCTG GGCAACCTGC AGGGTTTCTA CATTCCGTTG
CTGGACATGA TCTATGTGCT GGACGACACC AGCTGGCACA TGGCGGCAAT CGCCTCGCTG
GCGGCAAACG TGCTGTTGTT CACCCTGATC TCGCTGTTCA CCAACGCCAG CAACGAAGAG
GTCAGTGCGG CCGAAGCCTG CGCGGTGGAC AACGTGCGCC GCCCGCAACG CCGCGAGCTG
CACGCCGCCT CGCCCCAGGA GTTCGCCACT CAGCTGGCCA AACCGCTGGG GGCCAAGGCC
GCACAAAAGG AAGTGGAGCA AGCCCTGCGC GACCTCTACC TGCCGTTCGA CGAGCGCCGC
CCCTATGCCC TGCGCCGCCT GCGCGACCGC ATCGAGGCCA ACCTGTCCGG CCTGATGGGG
CCAAGCGTGG CCCAGGACAT GGTCGAGACG TTCCTGCCGT ACAAGTCCGG TAACGAAAAC
TACGTGACCG AAGACATCCA CTTCATCGAA AGCCGCCTGG AAGACTACCA CTCGCGTCTG
ACCGGCCTGG CCGCCGAGCT CGATGCCCTG CGCCGCTACC ACCGCCAAAC CCTGCAGGAG
CTGCCCATGG GCGTCTGCTC GCTGGCCAAG GACCAGGAAA TCCTGATGTG GAACAAGGCC
ATGGAAGAGC TTACCGGCAT TGCCGCCAAG CATGTGGTCG GTTCGCGCCT GCTCACCATA
GACGAGCCTT GGCGCGGCCT GCTGCAAGGG TTCATCGACG TGCCCGACGA GCACCTGCAC
AAGCAGCGCC TGGCGCTGGA CGGCCAGCCG CGCTGGCTGA ACCTGCACAA GGCGGCCATC
GACGAGCCGT TGGCCCCCGG TAACAGTGGC CTGGTGCTGC TGGTGGAAGA CCTGACCGAG
ACCCAGGCAC TGGAGGACAA GCTGGTGCAC TCCGAGCGCC TGGCCAGTAT CGGCCGCCTG
GCCGCCGGCG TGGCCCACGA AATCGGCAAC CCGATCACTG GCATCGCTTG CCTGGCGCAG
AACCTGCGTG AAGAACGCGA AGGCGATGGC GAAATCATCG AGCTGTCCAG CCAGATCCTC
GACCAGACCA AGCGCGTGTC GCGCATCGTC CAGTCGTTGA TGAGCTTCGC CCATGCCGGT
GGCAGCCACC AGAACAGCGA GGAACCCGTG TGCCTGGCCG AAGTGGCACA GGATGCCATC
GGTCTGCTGG CGTTGAACCG GCGCAATTTC GAAGTACAGT TCTTCAACCT CTGCGACCCA
GACCACTGGG CCGAAGGGGA CCCGCAGCGC CTGGCCCAGG TGCTGATCAA CCTGCTCTCC
AACGCCCGCG ACGCCTCGCC CGCCGGCAGT GCCGTGCGCG TGCGTAGCGA GACCAGTGAG
CACACCGTCG ACCTGATCGT CGAAGACGAG GGCAGCGGGA TTCCGAAGAA CATCCAGGAC
CGCCTGTTCG AACCCTTCTT CACCACCAAG GACCCGGGCG AAGGAACCGG ACTGGGGCTC
GCTCTGGTCT ATTCCATCGT GGAAGAGCAT TATGGGCAAA TCACCATCGA CAGCCCGGCC
GATATCGAAC GGCAACGTGG CACCCGGATC CGCGTGACCC TGCCCCGGCA TGTCGTAGCG
ACGTCCCCTG AAATTCGAGA CCGTCGAGAG AATTGA
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| Protein sequence | MPMSFSLTQM ILISAGYLMV LFGVAWISER GLIPRSIIRH PLTYTLSLGV YASAWAFYGS
VGLAYQYGYG FLACYLGVSG AFLLAPVLLY PILKITRTYQ LSSLADLLAF RFRSTWAGAL
TTIIMLIGVL PLLALQIQAV ADSISILTGE PVKARVAFAF CTLIILFTIF FGSRHIATRE
KHEGLVFAIA FESVIKLLAL GGIGLYALYG VFGGPHELEV WLLQNQTALA ALHTPLQEGP
WRTLLLVFFA SAIVMPHMYH MAFTENLNPR SLVSASWGLP LFLLLMSLAV PLVLWAGLRL
GASTNPEYFT LGLGIAANNQ ALALLAYIGG LSAASGLIIV TTLALSGMAL NHLVLPLYQP
PAEGNIYRWL KWTRRALIVA IITAGFMFYL TQNNHQSLAN LGIVAFVATL QFLPGVLSVL
YWPTANRRGF IAGLLAGTLV WMVTMLLPLL GNLQGFYIPL LDMIYVLDDT SWHMAAIASL
AANVLLFTLI SLFTNASNEE VSAAEACAVD NVRRPQRREL HAASPQEFAT QLAKPLGAKA
AQKEVEQALR DLYLPFDERR PYALRRLRDR IEANLSGLMG PSVAQDMVET FLPYKSGNEN
YVTEDIHFIE SRLEDYHSRL TGLAAELDAL RRYHRQTLQE LPMGVCSLAK DQEILMWNKA
MEELTGIAAK HVVGSRLLTI DEPWRGLLQG FIDVPDEHLH KQRLALDGQP RWLNLHKAAI
DEPLAPGNSG LVLLVEDLTE TQALEDKLVH SERLASIGRL AAGVAHEIGN PITGIACLAQ
NLREEREGDG EIIELSSQIL DQTKRVSRIV QSLMSFAHAG GSHQNSEEPV CLAEVAQDAI
GLLALNRRNF EVQFFNLCDP DHWAEGDPQR LAQVLINLLS NARDASPAGS AVRVRSETSE
HTVDLIVEDE GSGIPKNIQD RLFEPFFTTK DPGEGTGLGL ALVYSIVEEH YGQITIDSPA
DIERQRGTRI RVTLPRHVVA TSPEIRDRRE N
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