Gene PputGB1_4688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4688 
Symbol 
ID5872499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5237920 
End bp5238237 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content63% 
IMG OID641549824 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001670910 
Protein GI167035679 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0626972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000488951 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTTCC TTTGTAACTC CCACGGCCTG GCCGAAGGCC AAAGCCGCGC CTTCAGCGTA 
GACGGGCTCG AACTGTTCGG CGTGCGCCGC CAGGGCCAGG TTTACCTGTA CCGCAACCGC
TGTCCACACC GGGGCATCCC GCTGAACTGG GCAGAAGACG CGTTTCTGGA CGACGGCGCC
AGCCTCATCC ACTGCGCCCA TCATGGCGCG CTGTTCCTGA TAGAAAGCGG CGAATGCGTG
GCCGGCCCCT GTGAGGGTGA TCAACTGCAG GCCCTGGGCT GCCTCGAAGA CAGCCAGGGC
ATCTGGTTCA AGGGTTAA
 
Protein sequence
MHFLCNSHGL AEGQSRAFSV DGLELFGVRR QGQVYLYRNR CPHRGIPLNW AEDAFLDDGA 
SLIHCAHHGA LFLIESGECV AGPCEGDQLQ ALGCLEDSQG IWFKG