Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4688 |
Symbol | |
ID | 5872499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5237920 |
End bp | 5238237 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641549824 |
Product | Rieske (2Fe-2S) domain-containing protein |
Protein accession | YP_001670910 |
Protein GI | 167035679 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0626972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000000488951 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATTTCC TTTGTAACTC CCACGGCCTG GCCGAAGGCC AAAGCCGCGC CTTCAGCGTA GACGGGCTCG AACTGTTCGG CGTGCGCCGC CAGGGCCAGG TTTACCTGTA CCGCAACCGC TGTCCACACC GGGGCATCCC GCTGAACTGG GCAGAAGACG CGTTTCTGGA CGACGGCGCC AGCCTCATCC ACTGCGCCCA TCATGGCGCG CTGTTCCTGA TAGAAAGCGG CGAATGCGTG GCCGGCCCCT GTGAGGGTGA TCAACTGCAG GCCCTGGGCT GCCTCGAAGA CAGCCAGGGC ATCTGGTTCA AGGGTTAA
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Protein sequence | MHFLCNSHGL AEGQSRAFSV DGLELFGVRR QGQVYLYRNR CPHRGIPLNW AEDAFLDDGA SLIHCAHHGA LFLIESGECV AGPCEGDQLQ ALGCLEDSQG IWFKG
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