| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4668 |
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| Symbol | |
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| ID | 5872476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5205250 |
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| End bp | 5206521 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549801 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001670890 |
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| Protein GI | 167035659 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.665798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.140275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGA CCCGCAAGCG TAGCGTGCGC CCCACCCTGC GCTCGGTGCT GGGCCGTGGC
CACCTCAGCG TCGCCTTGCT TGCCGTGGGC CTGGCGGGTA TTTCCTTGAC CCTGCTGGGC
GTGCTCGCCC TGCGTGTCTA CGCCAACCAA AACCTGCAGC TGATTGCCCG CTCGATCAAT
TACACCGTAG AGGCAGCGGT GGTGTTCGAT GACAGCGCCG CCGCCAATGA ATCGCTGGCG
CTGATCGCCA GTACCGAGGA AGTGGCCGAG GCCAAGGTCT TCAACGACGA AGGCGAGCTG
TTGGCGCACT GGCAACGCGG CGACACCGAC ATGCTCGCGC AACTGGAAGT GCAGGTTGCC
ACCGCGTTGC TGGATGAGCC GGTCAACCTG CCGATCCTGC ACCAGCAACA ACAGGTCGGG
CATATCGAAC TGGTCGGCCA GGGCCGTAGC CTGTTGCTGT TCCTGCTCAG CGGTCTGGCC
GGCATCCTGT TCTGCACCAT CCTCAGCGCC TTGGCTGCCC AGTACCTGTC GCGGCGCCTG
CTCAGCGATA TCACCCGCCC TCTGCGTGGC CTGGCCAGTG TCGCCCACGC CGCCCGCCGC
GAGCGTAGCT TCGACCGGCG TGTGCCGGAA GCGCCGATTG CCGAGCTCAA CGAGCTGGGT
AACGACTTCA ATGCCCTGCT GGACGAACTG GAGGTGTGGC ACAGCCACCT GCAGAGTGAA
AACCAGAGCC TGGCCCACCA GGCCAGCCAC GATAGCCTGA CTGGCCTGCC CAACCGGGCC
TTCTTCGAGG GGCGCCTGAG CCGCAGCGTG CGCAATGCTG CACGGCAGCA GGACCACTTG
GCCTTGCTGT TCCTCGACAG CGATCACTTC AAGCAAATCA ACGACACCCT CGGCCATGCC
GTAGGCGACG AGGTGCTGAT CAGCGTGGCC GACCGCGTAC GCGCCCAGTT GCGCGAACAC
GACCTGGTGG CGCGCCTGGG CGGTGATGAG TTCGCCGTGC TGCTGACACC TTTGCAGTCG
CGCAAGGACG CCGAACACAT CGCCGAGAAG ATCGTTGCCA GCATGAAGCT GCCGGTGCAG
CTGGACAGTG GCCGCAGTAT CGCCACCTCA CTGAGTGTCG GTATTGCCTA TTACCCGGAT
GACGGCGCTG ACCCCGCCAG TCTTCTCAAT GCCGCCGATG CGGCGATGTA CCAGGCCAAG
CGTAAACGCC GTGGCCATTG GCAAGTGGCG CAGACGGAAC GGTCCGCCAA CGAAATCAAG
AACAGGAGCT GA
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| Protein sequence | MKPTRKRSVR PTLRSVLGRG HLSVALLAVG LAGISLTLLG VLALRVYANQ NLQLIARSIN
YTVEAAVVFD DSAAANESLA LIASTEEVAE AKVFNDEGEL LAHWQRGDTD MLAQLEVQVA
TALLDEPVNL PILHQQQQVG HIELVGQGRS LLLFLLSGLA GILFCTILSA LAAQYLSRRL
LSDITRPLRG LASVAHAARR ERSFDRRVPE APIAELNELG NDFNALLDEL EVWHSHLQSE
NQSLAHQASH DSLTGLPNRA FFEGRLSRSV RNAARQQDHL ALLFLDSDHF KQINDTLGHA
VGDEVLISVA DRVRAQLREH DLVARLGGDE FAVLLTPLQS RKDAEHIAEK IVASMKLPVQ
LDSGRSIATS LSVGIAYYPD DGADPASLLN AADAAMYQAK RKRRGHWQVA QTERSANEIK
NRS
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