| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4665 |
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| Symbol | |
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| ID | 5872473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5202113 |
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| End bp | 5203639 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549798 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001670887 |
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| Protein GI | 167035656 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0943847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.197111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC CGCAATCCCC TAACAGCACC AAGGTCGAGC AGGTGAAGCT GCTGATTGAC
GGCCAGTGGG TCGAGTCCAA AACCACCGAA TGGCGCGACA TCGTCAACCC GGCCAGCCAG
GAAGTGCTGG CGCGCGTACC GTTCGCCACC GTCGAGGAAG TCGACGCTGC CGTGGCCGCG
GCCCACCGAG CCTTCCAGAC CTGGCGCGAC ACCCCGATCG GCGCGCGCAT GCGCATCATG
CTCAAGCTGC AGGCGCTGAT CCGCGAACAC ACCAAACGCA TTGCCCAGGT GCTCAGTGCC
GAACAAGGCA AAACCCTGGC CGATGCTGAA GGCGATATTT TCCGCGGCCT GGAAGTGGTC
GAGCACGCCG CCTCCATCGG CACCCTGCAG ATGGGCGAAT TTGCCGAAAA CGTCGCAAGC
GGTGTCGACA CCTACACCCT GCGCCAGCCG ATCGGTGTGT GCGCCGGCAT CACCCCGTTC
AACTTCCCGG CGATGATCCC GCTGTGGATG TTCCCCATGG CCATCGTCTG CGGCAACACC
TTCGTGCTCA AACCTTCCGA ACAAGACCCG CTGTCGACCA TGCTGCTGGT GGAGCTGGCG
CTGGAAGCCG GTGTGCCGGC CGGTGTGCTG AACGTGGTGC ACGGCGGCAA GCAGGTGGTG
GATGCCATTT GCACCCATCA GGACATCAAG GCGATTTCCT TCGTCGGCTC AACCGAAGTC
GGCACCCACG TTTACAACCT CGGTAGCCAA CACGGCAAGC GCGTGCAGTC GATGATGGGC
GCCAAGAACC ATGCGGTGGT GCTGCCCGAT GCCAACCGCA CGCAAACCAT CAATGCTTTG
GTAGGTGCTG CCTTTGGTGC GGCGGGCCAA CGCTGCATGG CCACCTCGGT GGCGGTGCTG
GTGGGCAAGG CCCGCGAATG GCTGCCAGAT ATCAAGGCAG CCGCCAGCAA GCTCAAGGTC
AATGCCGGCT GTGAGCCAGG CACCGACGTT GGCCCGGTGG TTTCCAAGCG CGCCAAGGAG
CGCGTCCTGG GCCTGATCGA AAGCGGTATC AAGGAAGGCG CCAAGCTTGA GCTGGACGGC
CGCGACGTCA AGGTGCCGGG TTACGAGCAA GGTAACTTCG TTGGCCCGAC CCTGTTCTCG
GGCGTGAAGA CCGATATGCA GGTGTATACC CAGGAAATCT TCGGCCCGGT GCTGGTGACC
CTGGAAGTCG ATACCCTCGA CGAGGCCATC GCCCTGGTCA ACGCCAACCC GTTCGGCAAC
GGCACCGGCC TGTTTACTCA AAGCGGCGCG GCAGCACGCA AGTTCCAGAG CGAAATCGAT
ATCGGCCAGG TCGGCATCAA CATCCCGATT CCGGTACCGG TACCGTTCTT CAGCTTTACC
GGCTCACGTG GCTCCAAGCT CGGCGACCTC GGCCCGTACG GCAAGCAAGT GGTGCAGTTC
TACACTCAGA CCAAGACCGT CACTGCCCGC TGGTTCGATG ACGACAGCGT CAACGACGGT
GTGAACACCA CCATCAGCCT GCGCTAA
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| Protein sequence | MNAPQSPNST KVEQVKLLID GQWVESKTTE WRDIVNPASQ EVLARVPFAT VEEVDAAVAA
AHRAFQTWRD TPIGARMRIM LKLQALIREH TKRIAQVLSA EQGKTLADAE GDIFRGLEVV
EHAASIGTLQ MGEFAENVAS GVDTYTLRQP IGVCAGITPF NFPAMIPLWM FPMAIVCGNT
FVLKPSEQDP LSTMLLVELA LEAGVPAGVL NVVHGGKQVV DAICTHQDIK AISFVGSTEV
GTHVYNLGSQ HGKRVQSMMG AKNHAVVLPD ANRTQTINAL VGAAFGAAGQ RCMATSVAVL
VGKAREWLPD IKAAASKLKV NAGCEPGTDV GPVVSKRAKE RVLGLIESGI KEGAKLELDG
RDVKVPGYEQ GNFVGPTLFS GVKTDMQVYT QEIFGPVLVT LEVDTLDEAI ALVNANPFGN
GTGLFTQSGA AARKFQSEID IGQVGINIPI PVPVPFFSFT GSRGSKLGDL GPYGKQVVQF
YTQTKTVTAR WFDDDSVNDG VNTTISLR
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