Gene PputGB1_4662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4662 
Symbol 
ID5872470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5199745 
End bp5200722 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content53% 
IMG OID641549795 
Producthypothetical protein 
Protein accessionYP_001670884 
Protein GI167035653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.209439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.393373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG CCCGCGCGTT TCTCAACCTC AAGCTGCAAA ACTATCATCG GCTCAAATCC 
GACCTCGCAC TGAGCGGCCA TGCGCTGGAA AAATTTGATG TTCTAAATTC GCACATTGCC
AATACGGTGG TGCGTAGCGG TGAGCTTATC ATCATTGGCG ACCCCACCAC GGCTTCCTGC
ACCAGCCAGG AAGCCTGGAT GATGAGGCAG GCTGCCATTG TGCACATGGG GCTGATGCGC
AACGGCCAAG GTGTGGATAA CTTCTTTCTG GATAATTTCG AGACTTTGAA AAGCCTGATC
GCGCATGCGT CAATGGGCGC TGGAATGGTC AGTGACGGAT GGAGCAGGCA CCTGAAGGCT
ATCGAGGTCA CCTTGATGGA TATCGAAAAA CTCCACCAGC AGTTTCTTGG GTCAGGAACG
ATGACAGCCC GCGAACAGTT CTATGCGAAG CGATCGGCCT TGTTCATGAA ACTGGATGAA
CAGTTGGGCA AGATGGCGGC TTATGGTTCA GGCCTGAGAA ACAAGGGATC GATCAAAAGG
ACGCTGGGAA TATCCACCAA GCGTTATATT CACACAGGCG AAATAGCCGG TTACGCCAAC
AAGGTAGCCA GTGTCGCGAG GGCATCCAGC TTGATCAAAC AAGGAACTTA CATAGGCGTA
GCACTTGAAA TCGCAGCCAC TGGACTGGAT ATCCACAACG CTTGTACGCT CGGTCACGAA
GAGGATTGCA CAAGGGCAAA GTACATCGAC GGAGGCTCAC TCGTGGGAGG CCTTGCAGGA
GGCGGTGCAG GCGGATATTT GGGTGGAGCT ATTATCGCGC CAGTTTTATG CGCAGCGATC
GGGTTACCAA CAGGTGGAAC AGGTGGGCTT CTTTGTGCAG TTATAATTGG TGCCGCAGGC
GCCACAATTG GAGGCAAGGC TGGTGGGGAG AAAGGTGAAG CTTACGGCGA TTTTTTGTAT
AGAGCGCTCT CAAACTGA
 
Protein sequence
MSEARAFLNL KLQNYHRLKS DLALSGHALE KFDVLNSHIA NTVVRSGELI IIGDPTTASC 
TSQEAWMMRQ AAIVHMGLMR NGQGVDNFFL DNFETLKSLI AHASMGAGMV SDGWSRHLKA
IEVTLMDIEK LHQQFLGSGT MTAREQFYAK RSALFMKLDE QLGKMAAYGS GLRNKGSIKR
TLGISTKRYI HTGEIAGYAN KVASVARASS LIKQGTYIGV ALEIAATGLD IHNACTLGHE
EDCTRAKYID GGSLVGGLAG GGAGGYLGGA IIAPVLCAAI GLPTGGTGGL LCAVIIGAAG
ATIGGKAGGE KGEAYGDFLY RALSN