| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4651 |
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| Symbol | |
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| ID | 5872459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5188731 |
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| End bp | 5189450 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549784 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_001670873 |
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| Protein GI | 167035642 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.93005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAC AGGACAACAG CCGCTTCGTG ATCCGTGATC GCAACTGGCA CCCCAAAGCC
CTTACGCCTG ACTACAAAAC GTCCATCGCC CGCTCGCCGC GCCAGGCACT GGTCAGCATT
CCGCAGTCGA TCAGCGAAAC CACTGGTCCG GACTTTTCCC ACTTGGGCTT CGGTACCCAC
GACCATGACC TGCTGCTGAA CTTCAACAAC GGTGGCTTGC CGATCGGTGA ACGCATCATC
GTCGCCGGCC GTGTCGTCGA TCAGTACGGC AAGCCTGTAC CGAACACCCT GGTAGAGATG
TGGCAAGCCA ACGCCGGCGG CCGCTATCGC CACAAGAACG ACCGTTACCT GGCGCCGCTG
GACCCGAACT TCGGTGGCGT TGGCCGCTGC CTGACCGACC GTGACGGCTA CTACAGTTTC
CGCACCATCA AGCCGGGCCC GTACCCATGG CGCAATGGCC CCAACGACTG GCGCCCGGCG
CACATCCACT TCGCCATCAG CGGCCCGTCG ATCGCCACCA AGCTGATTAC CCAGTTGTAT
TTCGAGGGTG ACCCGCTGAT CCCGATGTGC CCGATCGTCA AGTCGATCGC AAACCCTGAA
GCTGTGCAGC AGTTGATCGC CAAACTCGAC ATGAGCAACG CCAACCCGAT GGACTGCCTG
GCCTACCGCT TCGACATCGT GCTGCGTGGC CAGCGCAAGA CCCACTTCGA AAACTGCTGA
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| Protein sequence | MPAQDNSRFV IRDRNWHPKA LTPDYKTSIA RSPRQALVSI PQSISETTGP DFSHLGFGTH
DHDLLLNFNN GGLPIGERII VAGRVVDQYG KPVPNTLVEM WQANAGGRYR HKNDRYLAPL
DPNFGGVGRC LTDRDGYYSF RTIKPGPYPW RNGPNDWRPA HIHFAISGPS IATKLITQLY
FEGDPLIPMC PIVKSIANPE AVQQLIAKLD MSNANPMDCL AYRFDIVLRG QRKTHFENC
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