| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4644 |
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| Symbol | |
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| ID | 5872452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5180968 |
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| End bp | 5181975 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641549777 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_001670866 |
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| Protein GI | 167035635 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.39866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATCG ACCTTCCGCT GATCTGGGCC GTGATCATCA TTTTCGGCGT CATGATGTAC
GTGGTGATGG ACGGTTTCGA CCTGGGCATC GGCATGCTGT TCCCCTTCGT CAAGGGCGAG
CAGGACCGTG ATGTGATGAT GAACACTGTC GCGCCAGTGT GGGACGGCAA CGAAACCTGG
TTGATCCTGG GCGGGGCGGG GCTGTTCGGG GCTTTCCCGA TGGCTTACGC GGTCGTTCTC
GAGGCCTTGT ACCTGCCGCT TATCCTGATG TTGATCGGTT TGATCTTCCG TGGCGTGGCC
TTCGAGTTTC GCTTCAAGGC CAAGGCCGAC AAGCGGCATA TCTGGGACAA GGCATTCATC
TGGGGGTCGT TGGTCGCCAC CTTCTTCCAG GGTGTGGCGT TGGGTGCCTT CCTCGAAGGC
TTCAAAGTGG TCGACCGCCA TTTCGCCGGT GGCACACTCG ACTGGCTTAC CCCGTTCAGT
CTGTTCTGTG GTTTGGGGCT GATCGTTGCC TACACGTTGT TGGGGTGCAC CTGGCTGATC
ATGAAGACCG AAGGGCCGCT GCAACAGAAG ATGCACGACA TGGCCCGGCC GCTGGCGCTG
GTGCTGCTGG CGGTGATCGG TATCGTCAGC CTGTGGACCC CCATCGCCTA CCCGCAAATC
GCCGACCGCT GGTTCAGCAT GCCAAACCTG CTCTGGTTCA TGCCGGTGCC GCTGCTGGTG
CTGGTGACCT TCTACGGGCT GCTGAAGGCG GTAGCGCGCA ATGCACACTA CACGCCGTTC
CTGCTCACCC TGGTGTTGAT CTTCCTGGGT TACAGTGGCC TGGGCATCAG CCTGTGGCCG
AACATCATCC CGCCGTCGAT CTCGATCTGG GAGGCCGCAG CGCCCCCGCA AAGCCAAGGT
TTCATGCTGG TGGGCACCCT GTTCATCCTG CCGTTCATCC TGATGTACAC CTTCTGGAGC
TACTACGTGT TCCGCGGCAA GGTGACCCAC GAAGACGGTT ATCACTAG
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| Protein sequence | MGIDLPLIWA VIIIFGVMMY VVMDGFDLGI GMLFPFVKGE QDRDVMMNTV APVWDGNETW
LILGGAGLFG AFPMAYAVVL EALYLPLILM LIGLIFRGVA FEFRFKAKAD KRHIWDKAFI
WGSLVATFFQ GVALGAFLEG FKVVDRHFAG GTLDWLTPFS LFCGLGLIVA YTLLGCTWLI
MKTEGPLQQK MHDMARPLAL VLLAVIGIVS LWTPIAYPQI ADRWFSMPNL LWFMPVPLLV
LVTFYGLLKA VARNAHYTPF LLTLVLIFLG YSGLGISLWP NIIPPSISIW EAAAPPQSQG
FMLVGTLFIL PFILMYTFWS YYVFRGKVTH EDGYH
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