| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4641 |
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| Symbol | |
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| ID | 5872449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5178757 |
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| End bp | 5179464 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641549774 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001670863 |
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| Protein GI | 167035632 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.226579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCACT GGAAACCCGA GCATCTTCAT GCGTTCGTCA GCGAGCGCAA CCCGCAGAAG
CTGTTCGACA TCGCAGTCCA TCTGGCTCAG GAGCTGGGCA TGGATTACCT TGGGCTGAAT
ATCCGCATCC AGATCGCCAC GCAAACACCA AGGCTGTACC TCTACAGCAA CTACCCAAGT
GAGTGGATCG AGCGCTATCA GCGCGACGAT TTCTACAAGC AGGACCCGGC AGCGCACATG
AGTCACAGTT CGACCACCCC CGTACTATGG ACTGACGACC TATACCGAGA CGCCCCTCAA
TTTCGCGAAG CGGCCTGTCA GCACGGCTTG CGTCACGGCT GGACGCAATC ACTGCACGAC
CTGCAGCACA ACGAAAGCCA GATCAGCGTG GCCAGACCTG CCGAAAAGAT CGACATCGTC
GAGCTTTATG ACAAGGCCGG CAGCGTCCAG TGGCTGTGCC ATACCCTGCA TGCCGTGCTT
GGCGAACACC ACCTGAACGC ACTGTGCCCA CCTCAACCAA GAATGAGCGA GCGTGAACTA
GAAGTGCTGA AATGGTCGGC TGCCGGCAAG ACCGCTGCCG ACGTTGCCTG CATCCTGTCG
CTTTCGCAAA GCACGGTGAA CTTCCACATC CGCAGCGTGA TCACCAAGAC CAACGCTGCC
AACAAGGCTG GCGCCATCGC CATCGCCGCC CTGCGTGGCT GGATCTGA
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| Protein sequence | MLHWKPEHLH AFVSERNPQK LFDIAVHLAQ ELGMDYLGLN IRIQIATQTP RLYLYSNYPS
EWIERYQRDD FYKQDPAAHM SHSSTTPVLW TDDLYRDAPQ FREAACQHGL RHGWTQSLHD
LQHNESQISV ARPAEKIDIV ELYDKAGSVQ WLCHTLHAVL GEHHLNALCP PQPRMSEREL
EVLKWSAAGK TAADVACILS LSQSTVNFHI RSVITKTNAA NKAGAIAIAA LRGWI
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