Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4638 |
Symbol | |
ID | 5872446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5175770 |
End bp | 5177140 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549771 |
Product | DNA repair protein RadA |
Protein accession | YP_001670860 |
Protein GI | 167035629 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.854791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGG CCAAGCGCTT GTATGGCTGC ACCGAGTGCG GCGCGACCTT CCCCAAATGG GCCGGCCAGT GCGGCGAATG CGGGGCCTGG AACACGCTGG TCGAAACCAT GATCGAAAGC GGCGGCGCCG CAGCGCCCAG CAGCGGCCGC GCGGGTTGGA CCGGGCAGCA GGCACAGATC AAGACCTTGG CCGAAGTCAG CGTCGAAGAA ATCCCGCGCT TCACCACCAG CAGTACTGAA CTGGACCGCG TACTGGGCGG TGGCCTGGTG GATGGCTCTG TGGTGCTGAT TGGTGGTGAC CCCGGTATCG GCAAGTCGAC CATTTTGTTG CAAACGTTGT GCAACATCGC CGTCGGCATG CCGGCGCTGT ATGTCACCGG TGAGGAGTCG CAGCAACAGG TTGCCATGCG CTCACGGCGG CTGGGCCTGC CCCAGGACCA GCTCAAGGTA ATGACCGAAA CCTGCATCGA GACCATCATC GCTACGGCAC GCGTCGAGAA ACCCAGGGTG ATGGTGATCG ACTCGATCCA GACGATTTTC ACCGAGCAGC TGCAATCGGC CCCCGGCGGC GTGGCCCAGG TGCGCGAAAG CACGGCGTTG CTGGTGCGTT ACGCCAAGCA GAGCGGCACG GCGATCTTCC TGGTCGGCCA CGTGACCAAG GAAGGCTCGC TGGCCGGCCC GCGGGTACTG GAGCACATGG TCGATACCGT GCTGTATTTC GAAGGCGAGT CCGATGGCCG TCTGCGCTTG TTACGGGCGG TGAAGAACCG TTTTGGCGCG GTCAACGAGC TGGGCGTGTT CGGCATGACC GACCGTGGTC TTAAAGAAGT GTCCAACCCG TCGGCGATCT TCCTCAACCG TACCCAGGAA GAAGTGCCAG GCAGCGTGGT AATGGCTACC TGGGAGGGCA CCCGGCCAAT GCTGGTTGAA GTGCAGGCGC TGGTCGACGA TAGCCATCTG GCCAATCCGC GGCGGGTAAC CCTGGGCCTG GACCAGAACC GCCTGGCCAT GTTGCTGGCG GTGCTGCACC GTCATGGCGG TATTCCTACC CATGACCAGG ACGTGTTCCT CAACGTGGTG GGTGGGGTGA AGGTGCTGGA AACGGCTTCG GACCTGGCGC TGCTGGCGGC GGTCATGTCC AGCCTGCGCA ATCGGCCGCT GGCCCATGGT CTGCTGGTGT TTGGCGAGAT CGGCCTGTCG GGTGAGGTGC GGCCGGTGCC CAGTGGCCAG GAGCGCTTGA AGGAAGCGGC CAAGCACGGC TTCAAGCGGG CCATCGTGCC CAAGGGCAAT GCGCCGAAAG AGCCACCGGC GGGGTTGCAG GTGATTGCCG TGACCCGGCT GGAGCAAGCC CTGGATGCAT TGTTCGAGTA A
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Protein sequence | MAKAKRLYGC TECGATFPKW AGQCGECGAW NTLVETMIES GGAAAPSSGR AGWTGQQAQI KTLAEVSVEE IPRFTTSSTE LDRVLGGGLV DGSVVLIGGD PGIGKSTILL QTLCNIAVGM PALYVTGEES QQQVAMRSRR LGLPQDQLKV MTETCIETII ATARVEKPRV MVIDSIQTIF TEQLQSAPGG VAQVRESTAL LVRYAKQSGT AIFLVGHVTK EGSLAGPRVL EHMVDTVLYF EGESDGRLRL LRAVKNRFGA VNELGVFGMT DRGLKEVSNP SAIFLNRTQE EVPGSVVMAT WEGTRPMLVE VQALVDDSHL ANPRRVTLGL DQNRLAMLLA VLHRHGGIPT HDQDVFLNVV GGVKVLETAS DLALLAAVMS SLRNRPLAHG LLVFGEIGLS GEVRPVPSGQ ERLKEAAKHG FKRAIVPKGN APKEPPAGLQ VIAVTRLEQA LDALFE
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