| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4635 |
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| Symbol | |
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| ID | 5872443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5171272 |
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| End bp | 5173338 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549768 |
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| Product | carbon starvation protein CstA |
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| Protein accession | YP_001670857 |
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| Protein GI | 167035626 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.151575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.995482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACA ATAATAGCCT GCTACGCCAC ATTCCGTGGT TGGCGCTGGC AGTCATAGGG
GCCTGCGCGC TGGGTGTGGT TGCCCTGCGT CGCGGCGAGG CAATCAACGC CTTGTGGATC
GTGGTCGCGG CGGTGGCCAT TTACCTGGTT GCCTACCGTT ACTACAGCTT GTTCATCGCC
ACCAAGGTGA TGCAACTCGA CCCTCGCCGT GCCACCCCGG CGGTGCTCAA CAACGACGGT
CTGGACTACG TTCCGACCAA CAAACACATT CTTTTCGGTC ACCACTTCGC CGCCATCGCG
GGCGCAGGCC CCTTGGTCGG CCCGGTACTT GCCGCGCAAA TGGGCTACTT GCCCGGCACG
TTGTGGCTGA TTGCCGGCGT GGTGCTGGCC GGTGCGGTGC AGGACTTCAT GGTCCTGTTC
ATGTCTACCC GCCGCAATGG TCGCTCGCTG GGCGACATGG TGCGCGAGGA GATGGGCCGC
ATTCCGGGGA CCATCGCCCT GTTCGGCTGC TTCCTGATCA TGATCATCAT CCTCGCGGTG
TTGGCGTTGA TCGTGGTCAA GGCCCTCGCC GAAAGCCCGT GGGGCATGTT CACGGTGATG
GCGACCATCC CGATCGCGAT GTTCATGGGC ATCTACATGC GCTACATCCG CCCGGGCCGC
ATTGGCGAGA TCTCGGTGGT TGGCGTAGTG CTGCTGCTGG CGTCTATCTG GCTGGGCGGC
GTGATCGCTG CGGACCCGGT ATGGGGCCCG GCGTTCACCT TCACCGGGGT GCAGATCACC
TGGATGCTGG TGGGCTACGG CTTTGTCGCC GCCGTGCTGC CGGTCTGGCT GGTGCTGGCA
CCACGTGACT ACCTGTCGAC CTTCCTCAAG ATCGGCACCA TCGTGGGCCT GGCCATCGGT
ATCCTGATCA TTGCCCCCGA GCTGAAAATG CCGGCGCTGA CCCAGTTCAC CGACGGCACG
GGCCCTGTGT GGAAGGGCAC CCTGTTCCCG TTCCTGTTCA TCACCATTGC CTGTGGTGCG
GTGTCCGGCT TCCACGCGCT GATTTCCTCG GGGACCACCC CCAAGCTGCT GGATAACGAA
ACCAACGCCC GCTACATCGG CTACGGTGGC ATGCTGATGG AATCGTTCGT CGCCATCATG
GCCATGGTCG CCGCTTCGGT GATCGAGCCT GGCGTGTACT TCGCCATGAA CAGCCCGGCT
GCCGTGGTCG GTGCAGACGT AGCGTCGGTG GCGCAGACAG TCAGCAGCTG GGGCTTCCTG
ATTACACCCG AGCAGCTTGA AGCCGTCGCC CGTGACATCG GCGAGCACAC CATCCTGGCC
CGTGCTGGTG GTGCGCCTAC CTTGGCGGTC GGTATCGCGC AGATCCTGCA CCAGGTGTTG
CCAGGTGAAA ACACCATGGC CTTCTGGTAC CACTTCGCGA TCCTGTTCGA GGCGTTGTTC
ATCCTCACCG CAGTGGACGC CGGTACCCGA GCCGGGCGCT TCATGCTGCA GGACCTGCTG
GGCAGCTTCG TGCCAGCACT CAAACGCACT GAATCGTGGG GTGCCAACCT GCTCGCCACC
GCTGGCTGCG TGGCACTCTG GGGCTACCTG CTTTACCAGG GCGTGATCGA CCCGCTGGGC
GGCATCAACA CCCTGTGGCC GCTGTTTGGC ATCTCCAACC AGATGCTGGC CGGTATCGCC
TTGATGCTCG GTACCGTGGT GCTGATCAAG ATGAAGCGTC AGCGCTACAT CTGGGTCACC
CTGCTGCCGG CCGTCTGGCT GCTGATCTGC ACCACTGCTG CTGGCCTGAT CAAGCTGTTC
GACCCGAACC CGGCGGTTGG CTTCCTGGCC CTGGCCAAGA AGTACAGCAC CGCGCTGGAC
GCAGGCCAAG TGCTGGCCCC GGCCAAGGAC ATCGGGCAGA TGCAGCACGT GATCTTCAAC
GCCTACACCA ACGCGGGCCT GACGATTCTG TTCCTGCTGG TGGTCTTCAG CATCCTGTTC
TTCGCCATCA AGGTCGGCTA CGCCGCCCTG GGCCGCAAGG AGCGCACCGA CAAGGAAACC
CCGTTCCAGG CGTTGCCTGA CGCGTAA
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| Protein sequence | MNNNNSLLRH IPWLALAVIG ACALGVVALR RGEAINALWI VVAAVAIYLV AYRYYSLFIA
TKVMQLDPRR ATPAVLNNDG LDYVPTNKHI LFGHHFAAIA GAGPLVGPVL AAQMGYLPGT
LWLIAGVVLA GAVQDFMVLF MSTRRNGRSL GDMVREEMGR IPGTIALFGC FLIMIIILAV
LALIVVKALA ESPWGMFTVM ATIPIAMFMG IYMRYIRPGR IGEISVVGVV LLLASIWLGG
VIAADPVWGP AFTFTGVQIT WMLVGYGFVA AVLPVWLVLA PRDYLSTFLK IGTIVGLAIG
ILIIAPELKM PALTQFTDGT GPVWKGTLFP FLFITIACGA VSGFHALISS GTTPKLLDNE
TNARYIGYGG MLMESFVAIM AMVAASVIEP GVYFAMNSPA AVVGADVASV AQTVSSWGFL
ITPEQLEAVA RDIGEHTILA RAGGAPTLAV GIAQILHQVL PGENTMAFWY HFAILFEALF
ILTAVDAGTR AGRFMLQDLL GSFVPALKRT ESWGANLLAT AGCVALWGYL LYQGVIDPLG
GINTLWPLFG ISNQMLAGIA LMLGTVVLIK MKRQRYIWVT LLPAVWLLIC TTAAGLIKLF
DPNPAVGFLA LAKKYSTALD AGQVLAPAKD IGQMQHVIFN AYTNAGLTIL FLLVVFSILF
FAIKVGYAAL GRKERTDKET PFQALPDA
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