| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4626 |
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| Symbol | |
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| ID | 5872434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5163392 |
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| End bp | 5164501 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549759 |
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| Product | agmatine deiminase |
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| Protein accession | YP_001670848 |
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| Protein GI | 167035617 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.192221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCC GTAGAACCTT CCTGCAACTG TCGTTGGCCG CCGGCCTCGG CGCTGGCCTT
GGCCTGCCCC TGGGGCTGGC CCGTGCCGAA GAACCGGGGC GCTGGTTCAT GCCTGACGAG
GGCGAATTGC AACAGCGCGC CTTCATCGCC TTTGGCGCCC AGGATGCGAT CTGGGAGGAC
TTCACCGCCG ACGTGCAAGC CGCACTCGGT CGCATTAGCC AGGCCATCGC GCGTTATCAG
CCGGTGACCG TGTTCTGCCG CGCCAGCGAG CGCCAGCTGG CCGAGCAGCA CTGTGGCCAC
CACAACACAC ATTTTGTCGA ATGCCAACTG GATGACATCT GGATGCGCGA CATCGGTGCC
AATTTCGTCG TCGACGATGA CGGCGCCCTG GCGGCGGTGG ACTTCAACTT CAATGGCTGG
GGCAACAAGC AGCGCCACCG TAACGATGCC CAGCTGGCCA AACGCGTTGC CACCCTGGCC
AACGCGCGCT ACCAGCGCAG CGAGCTGGTG GGGGAAGGGG GCGCCATCGA GGTGGACGGG
CACGGCACCG GCATCATGAC CGAGAGCAGT TGGGTCAATG CCAACCGCAA CCCGGACTGG
AGCAAAGCCG AGGTCGAGGC CGAGCTGAAG GCGCGGCTGG GCCTGAGCAA GATAATCTGG
CTGCCGGGCA TCGCCGGGGA AGACACCACT GATGGGCATG TGGATTTCTA CGCCCGCTTC
GTGCGGCCGG GTGTGGTGAT TGCCAACCTG GACAACGACC CGGACTCCTA TGACCACGCC
GTGACGCGTA AACACCTGGA AATCCTGAAG CAGGCCACCG ATGCCGAAGG CCGTAAACTG
CAGGTTCACG TGGTGTCACC GCCGCTGCGC GGGCGGCGTA ACAAGTTCAG CAAAGGTAAT
GACGACTTTG CAGCGGGGTA CATCAATTAC TTCGTGATCA ACGGCGCGAT CATCGCACCG
CAGTTCGGTG ATGCGCAGGC GGATGAGAAG GCCCGAGCAC TGCTGGCGGC GTTGTATCCA
GGGCGGGATA TCGTGCAACT GGACATCGAT GCCATCGCGG CTGGAGGTGG GGGGATTCAC
TGTGTGACCC ATCAGTGCCC GGCCGTTTGA
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| Protein sequence | MPSRRTFLQL SLAAGLGAGL GLPLGLARAE EPGRWFMPDE GELQQRAFIA FGAQDAIWED
FTADVQAALG RISQAIARYQ PVTVFCRASE RQLAEQHCGH HNTHFVECQL DDIWMRDIGA
NFVVDDDGAL AAVDFNFNGW GNKQRHRNDA QLAKRVATLA NARYQRSELV GEGGAIEVDG
HGTGIMTESS WVNANRNPDW SKAEVEAELK ARLGLSKIIW LPGIAGEDTT DGHVDFYARF
VRPGVVIANL DNDPDSYDHA VTRKHLEILK QATDAEGRKL QVHVVSPPLR GRRNKFSKGN
DDFAAGYINY FVINGAIIAP QFGDAQADEK ARALLAALYP GRDIVQLDID AIAAGGGGIH
CVTHQCPAV
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