| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4617 |
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| Symbol | |
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| ID | 5872425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5155533 |
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| End bp | 5156270 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549750 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001670839 |
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| Protein GI | 167035608 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGTG GCAACCAAAG GACAGACAAG TTGACCGCCC CGAACATGAA CAGCCCCATT
CTCGTTACCG GAGCCAGCCA GCGCGTCGGG CTGGCCCTGG CCCTTGAACT GGCACAGGCC
GGCCATACGG TGGTCAGTGC CAGCCGCAGC ATCCAGCCAC AGGCGGCCCA CCCGAACATC
GTGCAGTTCC AGGCCGACCT GTGCCAGCCA GCCGACCGCC AGGCCCTGAT CGACCACCTG
CACACCCATT ACGACGGCTT GCGCGCCATC ATCCATAACG CCTCGCTGTG GCTCGACGAT
GGCCTCGACA ACCTCGACAC CATGTTCCGC CTGCACGTCG AAGCGCCCTA CCACCTCAAC
CTGGCCCTGG GCGACCTGCT GGCCAAGGTG GAAAAGGCCG ACATCATCCA CATCTGCGAC
GAAACCTCTT CGCGCGGCAG TAAAAGCCAC ATCGGCTACG CCGCCACCAA GGCCGCGCTG
CAGAACATGG TGCTGTCATT TGCCGAAAAA TATGCGCCCA AGGTGCACGT GAACGGTATC
CTGCCCGGGC TGCTGATCCT CAAGGAAGGG GGTGACGAAG CCTACCGCCA GCAAACCCTG
AAAAAGGCCC TGCTGGAATT CGAACCCGGC GCCGGCCCGC TGATCGAGAC AGTCAAGTAC
CTGCTCGCCA GCCAGTACAG CACCGGCAGC CAGGTGGTCA TCAACGGTGG CCGCCACCTG
AAGAACCGCA TGACTTGA
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| Protein sequence | MLGGNQRTDK LTAPNMNSPI LVTGASQRVG LALALELAQA GHTVVSASRS IQPQAAHPNI
VQFQADLCQP ADRQALIDHL HTHYDGLRAI IHNASLWLDD GLDNLDTMFR LHVEAPYHLN
LALGDLLAKV EKADIIHICD ETSSRGSKSH IGYAATKAAL QNMVLSFAEK YAPKVHVNGI
LPGLLILKEG GDEAYRQQTL KKALLEFEPG AGPLIETVKY LLASQYSTGS QVVINGGRHL
KNRMT
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