| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4609 |
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| Symbol | |
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| ID | 5872417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5150038 |
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| End bp | 5150724 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641549742 |
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| Product | LrgB family protein |
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| Protein accession | YP_001670831 |
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| Protein GI | 167035600 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.242093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTG AACCCATGCC GCTGTTCTGG CTGGCGCTGA CCTTGCTGGC CTACCTGGGT
AGCCGCTGGC TGTACCGGCG CAGCAAGCGC TACCTGCTGT CGCCATTGAT CCTGGTGCCG
GTTTTGCTGC TGGCGGTGGC CGTGCCGCTG CATACAGCCT ATGCCGAGTA TGCCCGCAAC
ACCCACTGGT TGATGAGCGT GCTCGGCCCA GTGACCGTGG CTTTCGCGGT GCCGATCTGG
CAGCAGCGGG CCATGCTGGC GCGCCATTGG CCAGCCCTGA TGGTGGGCAT GGTGGCTGGT
AGCTGTGCCT CGATTGCCAG CTCCTGGGGC TTGGCGCACC TGCTGGCGCT GGACAGCGCA
ACCAGCCTGT CGCTGGTGCC GCGTTCGATC ACCACGCCCT TCGCCATGCC GCTGGCCCAC
GACCTGGGTG GCGTGCCGGA ACTGACGGCG GTGTTCGTGA TGTTCACTGG CGTGCTCGGC
GCCATGTTCG GCGGCGTGCT GCTGCGCTGG TTGCCGCTGC GTACACCGCT GGCACGGGGT
GCGCTGTTTG GTGTTGGCGC GCATGGCGCC GGGGTCAGCC GGGCGCAGGA GGTGGGCCGC
GAAGAAGGCT CGGTGGCCGG CCTGGTCATG GTCCTGACTG GGCTGCTCAA CCTGTTCGCA
GCGCCGCTGC TGGCCATGCT GCTCTGA
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| Protein sequence | MSLEPMPLFW LALTLLAYLG SRWLYRRSKR YLLSPLILVP VLLLAVAVPL HTAYAEYARN
THWLMSVLGP VTVAFAVPIW QQRAMLARHW PALMVGMVAG SCASIASSWG LAHLLALDSA
TSLSLVPRSI TTPFAMPLAH DLGGVPELTA VFVMFTGVLG AMFGGVLLRW LPLRTPLARG
ALFGVGAHGA GVSRAQEVGR EEGSVAGLVM VLTGLLNLFA APLLAMLL
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