| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4608 |
|---|
| Symbol | |
|---|
| ID | 5872416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5148956 |
|---|
| End bp | 5149861 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641549741 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001670830 |
|---|
| Protein GI | 167035599 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.692037 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATGG CCGAAATTCC ATTGTGCGTC TGGCGTACCC GGGGACAGAG TTTCATCTTC
CGGGGCCAGA GCATCCGCTA CTGGACCGCA GGGCAAGGAG AGCCCCTGCT TCTGTTACAC
GGTTTTCCCA CTGCCAGCTG GGATTGGCAC TACCTGTGGG GGCCTTTGAC CCAACGTTTC
CGGGTGATCG CGTGCGACAT GCTCGGTTTT GGCGATTCGG CCAAACCGGT TGATCATGCC
TACAGCCTGA TGGAGCAAGC GGACCTGCAG CAGGCCTTGC TTGCCCACCT GCAGGTCAAG
CAGCCGGTGC ATCTGCTGGC CCATGACTAT GGCGGCAGCG TGGCCCAGGA ATTGTTGGCG
CGCCATCATG AGCAGCGCGC CGACATCGCC AGTTGCGTGT TCCTCAACAG CGGGCTGTTC
CCCGAAAGCT GCCGCATGCT GCTGATCCAG AAGCTGCTGC TCAGCCGCTT TGGCTGGCTG
GTGGGGCGTT CGTTCGGGCG TGACGACCTG GTGCGCAATG TGACCCAGGT CTATGGCCCC
TGCACTCACC CCAGTGAGAG CGCGCTGGAT GACTTCTGGA GCCTGATCGC TACCAACCGG
GGTACACGCA TCCTGCACAA GTTGGTGGGC TACATGCCCG AGCGCAGGTT GCACCGTGAA
CGCTGGGTCG GGGCGATGCA GCGCAAAGGC GTACCACTGC GCTTCATCAA TGGCGTGGTC
GACCCACTGT CCGGCGGGCA CATGCTCGAG CGTTACCGGC AACTGGTGCC GGAGCCGGAC
ACCGTGCAGC TGCACGGCAT TGGCCATTAC CCCCATACCG AAGCGCCGAT GCAGGTGCTG
CGCCACTACC TGGCCTTTCG CGAACAACCG TCCAGCTACT ACCAGCCGAA AGTGGCGTGG
TCCTGA
|
|---|
| Protein sequence | MPMAEIPLCV WRTRGQSFIF RGQSIRYWTA GQGEPLLLLH GFPTASWDWH YLWGPLTQRF
RVIACDMLGF GDSAKPVDHA YSLMEQADLQ QALLAHLQVK QPVHLLAHDY GGSVAQELLA
RHHEQRADIA SCVFLNSGLF PESCRMLLIQ KLLLSRFGWL VGRSFGRDDL VRNVTQVYGP
CTHPSESALD DFWSLIATNR GTRILHKLVG YMPERRLHRE RWVGAMQRKG VPLRFINGVV
DPLSGGHMLE RYRQLVPEPD TVQLHGIGHY PHTEAPMQVL RHYLAFREQP SSYYQPKVAW
S
|
|---|
| |