Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4592 |
Symbol | |
ID | 5872400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5133720 |
End bp | 5135297 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549725 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_001670814 |
Protein GI | 167035583 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAG GCTTCCGCCA GGCCATGGCC TGGCTGCACA CCTGGACAGG CTTGATCTTC GGCTGGCTGT TGTTCGCCAT CTTCCTCACC GGCACGCTGT CGTATTTCAA GGAAGAAATC ACTCACTGGT CGCAGCCCGA AGTGCGCAGC CACGCCCTGG ACCCGGTCAA CAGCCTGGGG GTGGCGCAAC GTTACCTGCA GGACAATGCC GGGCATTCGG GTACCTGGTT CATCCGTATG CCCAATGCGC GTGAAGCGGC CCTGAGCGTG GGCTACCGCG ACCCCAATGG CGGGCCGCGT GGCTTTGTCA GCAAAACCCT CGATACCCAG ACCGGCCAGC CGGTGGAGGC ACGCGACAGC CGCGGTGGTG AGTTCTTCTA CCGCTTCCAT TTCCAGCTGC AGATGCCTCA TCCGTTTGGC CGTTGGCTGT CGACGTTCTG CGCTTTCATC ATGCTGCTGG GGCTGGTCAC CGGCATCATC ACCCACAAGA AGATCTTCAA GGAGTTCTTC ACCTTCCGCC CGGGCAAGGG CCAGCGCTCC TGGCTGGATG GGCACAATGC TATTGGCGTA TTGGTGCTGC CGTTTCACCT GATGATCAGC TACAGCAGCC TGGTGCTGTT CATGTACATG GTGATGCCGG CAGGCATCAT GGCCAGTTAC GGCAATGACA CCGACAAATA CTTCAATGAC CTGTTCGGCC GTAACGATGC GCCCAAGGCT GCCCAGGTGG CTACACCTCT GGTAGCGCTG CCGAGTTTGT ACGCCAAGGT GCAGGCACTG CAGCCGGGGG CGCGCATTGG CAACATCCAG GTGCAGAACC CAGGCGACAG CAATGCCCGC GTCACCTTCA CGCAATCGGC CGCCGACCAC GTGGCTTATC GGCGCAGCGC CAACTGGACT TTCGATGGCG CCAGTGGTGC GCTGCTGAGC CAGGGCAAGC CGGAGAGCGG GGCAATGATG ACCGCGTTCA GTTTCGCCGG GTTGCACATG GGTAACTTCG CCGGGCCCTG GCTGCGCTGG TTGTACTTCT TCTTTGGCGT GGCCGGTACT GCGGTGATCG GCACCGGGCT GGTGATGTGG TTGGGCAAGC GCCAGCTCAA GCACGCCAAA AGCGAGCACA TGCCAGGCGA GCTACGCCTG GTCGAGGTGC TCAATATTGC CAGCATGAGC GGCCTGTTAC TGGCAGTGGC GGGCTTTTTC TGGGCCAACC GGCTGATGCC CATGGGTGTC GAAGGCAGGT CGGACTGGGA GGTCAATGCA TTCTTCATCG CCTGGGGGCT GTCGCTGGTG CACGCCGTTT TGCGCAGTGG GCGCAGAGCC TGGGGCGAGC AACTGGCGTT GGGCGCGCTG GCCTTTACCT TGTTGCCGCT GCTCAATGGC CTGACGACCG ACCGGGGTTT GAACCATTCA CTGCCGGAAG GTGACTGGGC CATGGCCGGC TTCGACCTGA CTGCGCTGGG CACTGGCCTG TTCCTGGCCT GGCTGGCCAG CAAGATGCTG CGCAGCCCCA AGCCCGTAGC CAAGCGCGCC GCTCGTGCGG CAAAAAAGCC GAGCACTGAA ACGGCGGAGG CGAGCTGA
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Protein sequence | MKEGFRQAMA WLHTWTGLIF GWLLFAIFLT GTLSYFKEEI THWSQPEVRS HALDPVNSLG VAQRYLQDNA GHSGTWFIRM PNAREAALSV GYRDPNGGPR GFVSKTLDTQ TGQPVEARDS RGGEFFYRFH FQLQMPHPFG RWLSTFCAFI MLLGLVTGII THKKIFKEFF TFRPGKGQRS WLDGHNAIGV LVLPFHLMIS YSSLVLFMYM VMPAGIMASY GNDTDKYFND LFGRNDAPKA AQVATPLVAL PSLYAKVQAL QPGARIGNIQ VQNPGDSNAR VTFTQSAADH VAYRRSANWT FDGASGALLS QGKPESGAMM TAFSFAGLHM GNFAGPWLRW LYFFFGVAGT AVIGTGLVMW LGKRQLKHAK SEHMPGELRL VEVLNIASMS GLLLAVAGFF WANRLMPMGV EGRSDWEVNA FFIAWGLSLV HAVLRSGRRA WGEQLALGAL AFTLLPLLNG LTTDRGLNHS LPEGDWAMAG FDLTALGTGL FLAWLASKML RSPKPVAKRA ARAAKKPSTE TAEAS
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