Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4586 |
Symbol | |
ID | 5872394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5127281 |
End bp | 5128183 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549719 |
Product | hypothetical protein |
Protein accession | YP_001670808 |
Protein GI | 167035577 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.560139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGT CACTCTACCT GCTCACCGTC CTGATCTGGG GCACTACCTG GATCGCCTTG AAGCTCCAGC TGGGCGTGGT CGCCATCCCG GTCTCGATCG TCTATCGCTT CGCCCTGGCT GGCCTGATTC TGTTCGCCAT CCTGCTGCTC ACCCGCCGCC TGCAGCCGAT GAACCGGCGT GGCCACCAGA TCTGTCTGGC ACAGGGCTTT TGCCTGTTCT GCGTCAATTT CATGTGCTTT CTCACTGCCA GCCAGTGGAT CGCCAGTGGT CTGATCGCCG TGGTGTTCTC CACTGCAACC CTGTGGAACG CACTTAATGC GCGGGTCTTC TTCGGCCAGA AAATCGCCGC CAATGTACTG GGCGGTGGTG CCCTGGGCCT GCTTGGGCTG GGGCTGCTGT TCTGGCCCGA GCTGTCCCAT CATGCGGCCA GCCGTGAAAC CCTGTACGGC CTTGGCCTGG CGCTGCTCGG CACGCTGTGC TTCTCGGCGG GCAACATGCT GTCGAGCATG CAGCAGAAGG CCGGGCTCAA GCCCATGACC ACCAATGCCT GGGGCATGGT CTACGGGGCG GCCATGCTGA TGGTTTATTG CCTGGTCAGC GGCATTCCTT TCAACATGGA GTGGAACACC CGCTACATCG GTTCGCTGAT GTACCTGGTA ATTCCGGGTT CGGTGATCGG TTTCACCGCC TACCTGACCC TGGTCGGCCG CATGGGGCCA GAGCGCGCGG CCTACTGCAC GGTGCTGTTT CCGTTGGTGG CGTTGAATGT GTCGGCGGTG GCCGAGGGGT ATCAGTGGAC GGCACCGGCC TTGTTGGGGC TGGTGGCGGT GATGGCGGGG AATGTGCTGG TGTTTCGCAA GCCTCGGGTC CGGGTGGCTG GGGGTGTTGT GGTGGCCAAA TAG
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Protein sequence | MNLSLYLLTV LIWGTTWIAL KLQLGVVAIP VSIVYRFALA GLILFAILLL TRRLQPMNRR GHQICLAQGF CLFCVNFMCF LTASQWIASG LIAVVFSTAT LWNALNARVF FGQKIAANVL GGGALGLLGL GLLFWPELSH HAASRETLYG LGLALLGTLC FSAGNMLSSM QQKAGLKPMT TNAWGMVYGA AMLMVYCLVS GIPFNMEWNT RYIGSLMYLV IPGSVIGFTA YLTLVGRMGP ERAAYCTVLF PLVALNVSAV AEGYQWTAPA LLGLVAVMAG NVLVFRKPRV RVAGGVVVAK
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