| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4578 |
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| Symbol | |
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| ID | 5872386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5118518 |
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| End bp | 5119423 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549711 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001670800 |
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| Protein GI | 167035569 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.166046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCC CGGACATGAA CCTGCTCGTC GCCCTCGATG TCCTGCTCGA CGAGGGCAGC
GTGGTCGGCG CAGCTCAGCG AATGAACCTG AGCCCGGCGG CCATGAGCCG GACACTGGGG
CGCATTCGCG AAGCCATGGG TGACCCGATC CTGGTGCGTG CCGGCCGTGG CCTTGTGCCC
ACGCCGCGGG CGCTGGCCCT GCGCGAGCAG GTGCATGGGT TGGTAGAGCA AGCCGGGCAG
GTGTTCCGTA GCCGTGATGA TGTCGACCTG GTGAACCTGG ACCGTGCCTT CAACATACGC
ACCAATGACC TGTTCATCGC CCTGTACGGC GCCCAATTGC TGAGCATGAT GCTGGCCCAG
GCGCCGCGAA CGGTGTTGCG CTTCGTCCCG GAGGGCAGCG GTGACGATGA TGCGGTGCTG
CGCAACGGGC ATATCGATTT GATCATCAGC TCGGCCGTTG AACTTGGCCC GGAAATCAAG
GTGCAGAGCC TGTTCAGCAC CTACTTCGTG GGCCTGGCGC GTGTGGGGCA CCCGATTTTC
GACGCCCCGA TCACCCCAGA GCGTTTTGCT GCCTACCCGC AGATCAGCGT ATCGCGGCGC
GGCCGGGCCA ATGGGCCGAT CGATGTGGCG TTGGCCAACC ACAAGGTAGA GCGGCGGGTG
GCCCTGATCA CCACCAGCTT TCACTCGGCG ATGTTCTCAC TGCCGGATTC GGACTTGATC
CTGCCGATAC CCGCCAACAT CCTCAACAGT GTGCAGCGGC TGAAGCTGCC ATTGCGCTCG
TTCGAAATCC CGGTGCCGTT GGAGAAAGTC AATGTGAAGC AGGCGTGGCA CCCGCGTTTC
GACAACGACC CCGCACACCG TTGGCTGCGC CAGACGTTGA AAGCGTGTGG GCGCATTGAC
CCGTGA
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| Protein sequence | MQLPDMNLLV ALDVLLDEGS VVGAAQRMNL SPAAMSRTLG RIREAMGDPI LVRAGRGLVP
TPRALALREQ VHGLVEQAGQ VFRSRDDVDL VNLDRAFNIR TNDLFIALYG AQLLSMMLAQ
APRTVLRFVP EGSGDDDAVL RNGHIDLIIS SAVELGPEIK VQSLFSTYFV GLARVGHPIF
DAPITPERFA AYPQISVSRR GRANGPIDVA LANHKVERRV ALITTSFHSA MFSLPDSDLI
LPIPANILNS VQRLKLPLRS FEIPVPLEKV NVKQAWHPRF DNDPAHRWLR QTLKACGRID
P
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